RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 OR10G9Q8NGN4 311 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 OR10G7Q8NGN6 311 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 RNASE6Q93091 150 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 GP6Q9HCN6 339 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 METTL1Q9UBP6 276 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 FOXD3Q9UJU5 478 aaPredicted RBP8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 CHEK1O14757 476 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 GSTZ1O43708 216 aaPredicted RBP8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 IGF2P01344 180 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 CDC34P49427 236 aaPredicted RBP8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 SURF2Q15527 256 aaPredicted RBP8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 MRPL37Q9BZE1 423 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 PKIBQ9C010 78 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 ZNF319Q9P2F9 582 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 CACFD1Q9UGQ2 172 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 MSRB2Q9Y3D2 182 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 USP9YO00507 2555 aaPredicted RBP8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 PPP5D1E7EU14 171 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 LY6HO94772 140 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 SLC25A42Q86VD7 318 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 LRRC75AQ8NAA5 344 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 OR10Z1Q8NGY1 313 aa8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 MRPL13Q9BYD1 178 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-205ENST00000617310 PRR32B1ATL7 298 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 DAOP14920 347 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 CCL3L1P16619 93 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 CTRB1P17538 263 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 CD24P25063 80 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 CD200P41217 278 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 TMEM50BP56557 158 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 CTRB2Q6GPI1 263 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 ETFRF1Q6IPR1 90 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 LINC00114Q6XXX2 140 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 LRP11Q86VZ4 500 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 OR5P3Q8WZ94 311 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 AQP3Q92482 292 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 PRNDQ9UKY0 176 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 ERVFC1-1P60608 527 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 RUNX1Q01196 453 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 ABLIM2Q6H8Q1 611 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 UNQ5815/PRO19632Q6UWF5 114 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 OR4P4Q8NGL7 312 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 OR4X1Q8NH49 305 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 FAM168AQ92567 244 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 Q96M66 194 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 LINC00052Q96N35 136 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 RHOFQ9HBH0 211 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 KPTNQ9Y664 436 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 S4R3C0 116 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 HEATR5AQ86XA9 2040 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 E9PLN8 166 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 LIPFP07098 398 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 WNT5AP41221 380 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 ZIC4Q8N9L1 334 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 DUSP18Q8NEJ0 188 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 SOSTQ9BQB4 213 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 VKORC1Q9BQB6 163 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 OPN4Q9UHM6 478 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 TNCP24821 2201 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 EPG5Q9HCE0 2579 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 LY6G6EA0A0G2JKS1 128 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 CTDSPLO15194 276 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 IGHMP01871 453 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 SPP1P10451 314 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 RAG2P55895 527 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 H3F3AP84243 136 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 PAX5Q02548 391 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 PJVKQ0ZLH3 352 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 CXorf66Q5JRM2 361 aaPredicted RBP8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 GGNQ86UU5 652 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 RPRMLQ8N4K4 120 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 SCMH1Q96GD3 660 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 SEMA5BQ9P283 1151 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 OR51B2Q9Y5P1 312 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 WSB1Q9Y6I7 421 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 U3KQA8 63 aa8.63□□□□□ -1.03
SMARCA1-205ENST00000617310 USP9XQ93008 2570 aaPredicted RBP8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 C17orf100A8MU93 164 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 NDUFA2O43678 99 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 OR2C1O95371 312 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 KIR2DL2P43627 348 aaPredicted RBP8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 LOXL3P58215 753 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 AARDQ4LEZ3 155 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 RPL39P5Q59GN2 51 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 ZNF385CQ66K41 422 aaPredicted RBP8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 DYNLRB2Q8TF09 96 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 CABLES2Q9BTV7 478 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 C7orf69Q9H7B7 122 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 RYDENQ9NUL5 291 aaKnown RBP8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 AURKAIP1Q9NWT8 199 aaPredicted RBP8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 MIOXQ9UGB7 285 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 HSBP1L1C9JCN9 74 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 PROB1E7EW31 1015 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 TCTE3Q8IZS6 198 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 GRAMD2BQ96HH9 432 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 TMEM204Q9BSN7 226 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 REPIN1Q9BWE0 567 aaKnown RBP8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 VSIG10L2P0DP72 767 aa8.62□□□□□ -1.03
SMARCA1-205ENST00000617310 B2MP61769 119 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms