RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 LRRC30A6NM36 301 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 GCH1P30793 250 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 ZNF674Q2M3X9 581 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 TPRX1Q8N7U7 411 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 CLN8Q9UBY8 286 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 ODAMA1E959 279 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 MAP1LC3B2A6NCE7 125 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 C17orf98A8MV24 154 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 PTBP3O95758 552 aaKnown RBP14.43□□□□□ -0.1
NEK3-206ENST00000611833 CECR9P0C854 216 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 COL10A1Q03692 680 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 KIAA0141Q14154 515 aaPredicted RBP14.43□□□□□ -0.1
NEK3-206ENST00000611833 ACSF3Q4G176 576 aaPredicted RBP14.43□□□□□ -0.1
NEK3-206ENST00000611833 FAM90A2PQ658T7 463 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 C1orf162Q8NEQ5 155 aaPredicted RBP14.43□□□□□ -0.1
NEK3-206ENST00000611833 PRR7Q8TB68 274 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 MAP1LC3BQ9GZQ8 125 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 PARD6AQ9NPB6 346 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 SLC39A9Q9NUM3 307 aa14.43□□□□□ -0.1
NEK3-206ENST00000611833 DSPP15924 2871 aaKnown RBP14.43□□□□□ -0.1
NEK3-206ENST00000611833 OR5H1A6NKK0 313 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 CEBPZOSA8MTT3 80 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 B4DEV8 164 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 RBMXL2O75526 392 aaKnown RBP14.42□□□□□ -0.1
NEK3-206ENST00000611833 IFNA1P01562 189 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 CXCL1P09341 107 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 SSTR5P35346 364 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 SMIM21Q3B7S5 101 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 ZNF718Q3SXZ3 478 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 MRGPRGQ86SM5 289 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 RFESDQ8TAC1 157 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 SARAFQ96BY9 339 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 VAX2Q9UIW0 290 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 METRNQ9UJH8 293 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 IGHV3-43A0A0B4J1X8 118 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 TRAV17A0A0B4J275 112 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 CD55P08174 381 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 IGHV3-43DP0DP04 118 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 KITLGP21583 273 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 ERVFRD-1P60508 538 aa14.42□□□□□ -0.1
NEK3-206ENST00000611833 EIF4EBP1Q13541 118 aaPredicted RBP14.42□□□□□ -0.1
NEK3-206ENST00000611833 SEBOXQ9HB31 216 aaPredicted RBP14.42□□□□□ -0.1
NEK3-206ENST00000611833 TGIF2-C20orf24A0A0A6YYL0 155 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 P0C879 139 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 BEND4Q6ZU67 534 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 H2BFWTQ7Z2G1 175 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 OR13A1Q8NGR1 328 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 CA5BP1Q8WTZ4 195 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 LHX4Q969G2 390 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 P2RX4Q99571 388 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 TOLLIPQ9H0E2 274 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 TIMM9Q9Y5J7 89 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 CACNA1HO95180 2353 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 DEFB108AA8MXU0 73 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 PRR33A8MZF0 331 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 IFNL4K9M1U5 179 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 TUBG1P23258 451 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 EIF2S3P41091 472 aaKnown RBP14.41□□□□□ -0.1
NEK3-206ENST00000611833 PNRC1Q12796 327 aaPredicted RBP14.41□□□□□ -0.1
NEK3-206ENST00000611833 ATP6V1FQ16864 119 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 NCMAPQ5T1S8 102 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 DTD1Q8TEA8 209 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 LURAP1Q96LR2 239 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 TAAR6Q96RI8 345 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 TUBG2Q9NRH3 451 aa14.41□□□□□ -0.1
NEK3-206ENST00000611833 CYB5BO43169 146 aa14.4□□□□□ -0.1
NEK3-206ENST00000611833 ZNF737O75373 536 aa14.4□□□□□ -0.1
NEK3-206ENST00000611833 CLDN14O95500 239 aa14.4□□□□□ -0.1
NEK3-206ENST00000611833 BRWD1-AS2P59051 145 aa14.4□□□□□ -0.1
NEK3-206ENST00000611833 OR10P1Q8NGE3 313 aa14.4□□□□□ -0.1
NEK3-206ENST00000611833 TMEM147Q9BVK8 224 aa14.4□□□□□ -0.1
NEK3-206ENST00000611833 WASF3Q9UPY6 502 aa14.4□□□□□ -0.1
NEK3-206ENST00000611833 PSG11Q9UQ72 335 aa14.4□□□□□ -0.1
NEK3-206ENST00000611833 CACNA1GO43497 2377 aa14.4□□□□□ -0.1
NEK3-206ENST00000611833 RAB29O14966 203 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 SPINT2O43291 252 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 ZG16O60844 167 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 EDDM3AQ14507 147 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 Q3ZCU0 254 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 ZNF66Q6ZN08 573 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 RPP25LQ8N5L8 163 aaKnown RBP14.4□□□□□ -0.11
NEK3-206ENST00000611833 TCTEX1D1Q8N7M0 179 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 LRRC29Q8WV35 223 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 NIT2Q9NQR4 276 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 PLSCR4Q9NRQ2 329 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 LAMP3Q9UQV4 416 aa14.4□□□□□ -0.11
NEK3-206ENST00000611833 ZNF891A8MT65 544 aaPredicted RBP14.39□□□□□ -0.11
NEK3-206ENST00000611833 ST8SIA5O15466 376 aa14.39□□□□□ -0.11
NEK3-206ENST00000611833 CLN5O75503 358 aa14.39□□□□□ -0.11
NEK3-206ENST00000611833 RPS16P62249 146 aaKnown RBP14.39□□□□□ -0.11
NEK3-206ENST00000611833 LTC4SQ16873 150 aa14.39□□□□□ -0.11
NEK3-206ENST00000611833 ZNF610Q8N9Z0 462 aa14.39□□□□□ -0.11
NEK3-206ENST00000611833 ZDHHC16Q969W1 377 aa14.39□□□□□ -0.11
NEK3-206ENST00000611833 ZNF251Q9BRH9 671 aa14.39□□□□□ -0.11
NEK3-206ENST00000611833 DKK4Q9UBT3 224 aa14.39□□□□□ -0.11
NEK3-206ENST00000611833 DIDO1Q9BTC0 2240 aaKnown RBP14.39□□□□□ -0.11
NEK3-206ENST00000611833 IGHV2OR16-5A0A0B4J2B6 119 aa14.38□□□□□ -0.11
NEK3-206ENST00000611833 TNFSF13O75888 250 aa14.38□□□□□ -0.11
NEK3-206ENST00000611833 IGKV1D-33P01593 117 aa14.38□□□□□ -0.11
NEK3-206ENST00000611833 IGKV1-33P01594 117 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms