RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 GINS4Q9BRT9 223 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 NAA50Q9GZZ1 169 aaKnown RBP13.22□□□□□ -0.29
SSBP4-213ENST00000602088 AUNIPQ9H7T9 357 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 GAB2Q9UQC2 676 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 ADARB2-AS1A8MUL3 147 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 H0YJW9 148 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 TFAP2AP05549 437 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 CTXN2P0C2S0 81 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 CNTFRP26992 372 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 ALDH3B2P48448 385 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 CTF1Q16619 201 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 NSUN5P1Q3KNT7 163 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 UBE2NLQ5JXB2 153 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 GLDNQ6ZMI3 551 aaPredicted RBP13.21□□□□□ -0.29
SSBP4-213ENST00000602088 FOXRED2Q8IWF2 684 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 H1FOOQ8IZA3 346 aaPredicted RBP13.21□□□□□ -0.29
SSBP4-213ENST00000602088 SAMD12Q8N8I0 201 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 DRAXINQ8NBI3 349 aaPredicted RBP13.21□□□□□ -0.29
SSBP4-213ENST00000602088 FAM110DQ8TAY7 271 aaPredicted RBP13.21□□□□□ -0.29
SSBP4-213ENST00000602088 CHPT1Q8WUD6 406 aa13.21□□□□□ -0.29
SSBP4-213ENST00000602088 KCTD12Q96CX2 325 aaKnown RBP13.21□□□□□ -0.29
SSBP4-213ENST00000602088 S100A16Q96FQ6 103 aaKnown RBP13.21□□□□□ -0.29
SSBP4-213ENST00000602088 PSMB11A5LHX3 300 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 AP4M1O00189 453 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 NBR2O15453 112 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 XRCC3O43542 346 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 GABARAPO95166 117 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 SOX6P35712 828 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 LINC00205P59089 165 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 GPR107Q5VW38 600 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 CNIH2Q6PI25 160 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 NPBQ8NG41 125 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 HSPB9Q9BQS6 159 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 OR2D2Q9H210 308 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 ANXA10Q9UJ72 324 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 LINC00527Q9UJ94 153 aa13.2□□□□□ -0.3
SSBP4-213ENST00000602088 NOTCH1P46531 2555 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 H7C2Y5 167 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 KCNAB3O43448 404 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 NDUFA3O95167 84 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 ZNF329Q86UD4 541 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 STPG2Q8N412 459 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 ZNF383Q8NA42 475 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 OR4X2Q8NGF9 303 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 SDHAF2Q9NX18 166 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 WASHC3Q9Y3C0 194 aa13.19□□□□□ -0.3
SSBP4-213ENST00000602088 CMYA5Q8N3K9 4069 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 TCRBV4S1A1TA0A5B7 111 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 M0R1X1 148 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 RBBP9O75884 186 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 HLA-DRB1P01911 266 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 OPN1MWP04001 364 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 OPN1MW2P0DN77 364 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 OPN1MW3P0DN78 364 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 PTHLHP12272 177 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 C5orf64Q2M2E5 130 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 GPR141Q7Z602 305 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 GVQW1Q8N7I0 195 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 BEST4Q8NFU0 473 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 C5orf30Q96GV9 206 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 RNF5Q99942 180 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 COMMD3Q9UBI1 195 aa13.18□□□□□ -0.3
SSBP4-213ENST00000602088 ZNF107Q9UII5 783 aaPredicted RBP13.18□□□□□ -0.3
SSBP4-213ENST00000602088 RBM7Q9Y580 266 aaKnown RBP13.18□□□□□ -0.3
SSBP4-213ENST00000602088 TSSC4Q9Y5U2 329 aaPredicted RBP13.18□□□□□ -0.3
SSBP4-213ENST00000602088 HLA-DQB1P01920 261 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 IGF1P05019 195 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 RORCP51449 518 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 SLC35B1P78383 322 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 LIN54Q6MZP7 749 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 HOGA1Q86XE5 327 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 ACOT12Q8WYK0 555 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 R3HDM4Q96D70 268 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 KIAA1456Q9P272 454 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 OR2W1Q9Y3N9 320 aa13.17□□□□□ -0.3
SSBP4-213ENST00000602088 A0A1W2PRX2 142 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 RRHO14718 337 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 APOA2P02652 100 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 IGKV1-16P04430 117 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 NFYAP23511 347 aaPredicted RBP13.16□□□□□ -0.3
SSBP4-213ENST00000602088 CBX5P45973 191 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 LUMP51884 338 aaPredicted RBP13.16□□□□□ -0.3
SSBP4-213ENST00000602088 TAS2R20P59543 309 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 TMEM69Q5SWH9 247 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 PDPNQ86YL7 162 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 COMMD1Q8N668 190 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 OR4F17Q8NGA8 305 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 CMTM3Q96MX0 182 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 OR4F4Q96R69 305 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 GON7Q9BXV9 100 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 FBXL15Q9H469 300 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 ZNF580Q9UK33 172 aa13.16□□□□□ -0.3
SSBP4-213ENST00000602088 J3QRK9 145 aa13.15□□□□□ -0.3
SSBP4-213ENST00000602088 TUSC2O75896 110 aa13.15□□□□□ -0.3
SSBP4-213ENST00000602088 APOA1P02647 267 aa13.15□□□□□ -0.3
SSBP4-213ENST00000602088 EIF4EP06730 217 aaKnown RBP13.15□□□□□ -0.3
SSBP4-213ENST00000602088 THBS3P49746 956 aa13.15□□□□□ -0.3
SSBP4-213ENST00000602088 ARPC4P59998 168 aa13.15□□□□□ -0.3
SSBP4-213ENST00000602088 RPS16P62249 146 aaKnown RBP13.15□□□□□ -0.3
SSBP4-213ENST00000602088 TAGLNQ01995 201 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms