RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 ARL6IP5O75915 188 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 BRI3O95415 125 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 DIRAS3O95661 229 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 HSPB1P04792 205 aaKnown RBP10.53□□□□□ -0.72
TRIM28-211ENST00000597968 ARSBP15848 533 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 SERPINB10P48595 397 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 PSMD7P51665 324 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 HLA-DRB3P79483 266 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 TAGLNQ01995 201 aaKnown RBP10.53□□□□□ -0.72
TRIM28-211ENST00000597968 IRF3Q14653 427 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 ECSCRQ19T08 205 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 ACTBL2Q562R1 376 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 LIPKQ5VXJ0 399 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 PDPNQ86YL7 162 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.53□□□□□ -0.72
TRIM28-211ENST00000597968 LPAR5Q9H1C0 372 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 FBXL15Q9H469 300 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 C12orf4Q9NQ89 552 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 GAB2Q9UQC2 676 aa10.53□□□□□ -0.72
TRIM28-211ENST00000597968 HUWE1Q7Z6Z7 4374 aaKnown RBP10.53□□□□□ -0.72
TRIM28-211ENST00000597968 H7C2Y5 167 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 SLC17A2O00624 439 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 HSPA12AO43301 675 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 SOX15O60248 233 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 SAP30O75446 220 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 LY86O95711 162 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 HSMCR30P0CW71 290 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 CEACAM6P40199 344 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 NDPQ00604 133 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 PPP1R27Q86WC6 154 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 UFD1Q92890 307 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 DLX4Q92988 240 aaPredicted RBP10.52□□□□□ -0.73
TRIM28-211ENST00000597968 RHOVQ96L33 236 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 NICN1Q9BSH3 213 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 ELOVL1Q9BW60 279 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 ZNF221Q9UK13 617 aa10.52□□□□□ -0.73
TRIM28-211ENST00000597968 A0A0G2JLM5 398 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 FOXI3A8MTJ6 420 aaPredicted RBP10.51□□□□□ -0.73
TRIM28-211ENST00000597968 A8MZ25 164 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 APOA2P02652 100 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
TRIM28-211ENST00000597968 GP9P14770 177 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 CPEP16870 476 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 MAP2K4P45985 399 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 LGALS7P47929 136 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 RPS25P62851 125 aaKnown RBP10.51□□□□□ -0.73
TRIM28-211ENST00000597968 PITPNAQ00169 270 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 TPBGQ13641 420 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 PSG5Q15238 335 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 RPL39P5Q59GN2 51 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 TMEM91Q6ZNR0 172 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 OR56B1Q8NGI3 324 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 ABHD14BQ96IU4 210 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 OR4C12Q96R67 309 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 GFI1Q99684 422 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 C11orf54Q9H0W9 315 aaPredicted RBP10.51□□□□□ -0.73
TRIM28-211ENST00000597968 DUSP21Q9H596 190 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 ZMAT4Q9H898 229 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 RANGRFQ9HD47 186 aaPredicted RBP10.51□□□□□ -0.73
TRIM28-211ENST00000597968 Q9N2K0 584 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 METTL1Q9UBP6 276 aaKnown RBP10.51□□□□□ -0.73
TRIM28-211ENST00000597968 FBXO7Q9Y3I1 522 aa10.51□□□□□ -0.73
TRIM28-211ENST00000597968 A0A0A6YYD4 124 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 ZP3P21754 424 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 P2RY14Q15391 338 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 UNQ5815/PRO19632Q6UWF5 114 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 OR4A4PQ8NGN8 299 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 SETD6Q8TBK2 473 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 ARPC1AQ92747 370 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 OR5B12Q96R08 314 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 CCDC90BQ9GZT6 254 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 PLGRKTQ9HBL7 147 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 AK3Q9UIJ7 227 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 TPRKBQ9Y3C4 175 aa10.5□□□□□ -0.73
TRIM28-211ENST00000597968 AK6Q9Y3D8 172 aaKnown RBP10.5□□□□□ -0.73
TRIM28-211ENST00000597968 IGHV4OR15-8A0A075B7B6 117 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 A0A087WW49 117 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 FCN1O00602 326 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 SOCS1O15524 211 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 RGS10O43665 173 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 CA2P00918 260 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 SPNP16150 400 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 TMEM50BP56557 158 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 MRPS15P82914 257 aaKnown RBP10.49□□□□□ -0.73
TRIM28-211ENST00000597968 MLLT11Q13015 90 aaPredicted RBP10.49□□□□□ -0.73
TRIM28-211ENST00000597968 LFNGQ8NES3 379 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 MUC7Q8TAX7 377 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 ABHD5Q8WTS1 349 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 RCHY1Q96PM5 261 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 CMSS1Q9BQ75 279 aaKnown RBP10.49□□□□□ -0.73
TRIM28-211ENST00000597968 STUB1Q9UNE7 303 aa10.49□□□□□ -0.73
TRIM28-211ENST00000597968 TRDCB7Z8K6 153 aa10.48□□□□□ -0.73
TRIM28-211ENST00000597968 PROP1O75360 226 aa10.48□□□□□ -0.73
TRIM28-211ENST00000597968 RRASP10301 218 aa10.48□□□□□ -0.73
TRIM28-211ENST00000597968 AADACP22760 399 aa10.48□□□□□ -0.73
TRIM28-211ENST00000597968 CRHBPP24387 322 aa10.48□□□□□ -0.73
TRIM28-211ENST00000597968 SLURP1P55000 103 aa10.48□□□□□ -0.73
TRIM28-211ENST00000597968 CLDN12P56749 244 aa10.48□□□□□ -0.73
TRIM28-211ENST00000597968 TPPP2P59282 170 aa10.48□□□□□ -0.73
TRIM28-211ENST00000597968 RPS16P62249 146 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms