RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 RUNX1Q01196 453 aa13.9□□□□□ -0.18
CIRBP-243ENST00000593128 TMEM267Q0VDI3 215 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-243ENST00000593128 RNLSQ5VYX0 342 aa13.9□□□□□ -0.18
CIRBP-243ENST00000593128 EDARADDQ8WWZ3 215 aa13.9□□□□□ -0.18
CIRBP-243ENST00000593128 DLX4Q92988 240 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-243ENST00000593128 RIMS4Q9H426 269 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-243ENST00000593128 ZNF221Q9UK13 617 aa13.9□□□□□ -0.18
CIRBP-243ENST00000593128 IGHV4OR15-8A0A075B7B6 117 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 A0A087WW49 117 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 LINC01619G3V211 115 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 SLC17A2O00624 439 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 CA2P00918 260 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 SNRPBP14678 240 aaKnown RBP13.89□□□□□ -0.19
CIRBP-243ENST00000593128 CALRP27797 417 aaKnown RBP13.89□□□□□ -0.19
CIRBP-243ENST00000593128 INSL3P51460 131 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 AQP4P55087 323 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 TPPP2P59282 170 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 RPS16P62249 146 aaKnown RBP13.89□□□□□ -0.19
CIRBP-243ENST00000593128 ACTBL2Q562R1 376 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 ZNF429Q86V71 674 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 ARPC1AQ92747 370 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 ARHGAP5-AS1Q96IT6 56 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 GFI1Q99684 422 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 CMSS1Q9BQ75 279 aaKnown RBP13.89□□□□□ -0.19
CIRBP-243ENST00000593128 C12orf4Q9NQ89 552 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 ZNF355PQ9NSJ1 428 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 NKX1-2Q9UD57 310 aaPredicted RBP13.89□□□□□ -0.19
CIRBP-243ENST00000593128 TPRKBQ9Y3C4 175 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 SMAD5-AS1Q9Y6J3 95 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 RYR3Q15413 4870 aa13.89□□□□□ -0.19
CIRBP-243ENST00000593128 LGALS1P09382 135 aaKnown RBP13.88□□□□□ -0.19
CIRBP-243ENST00000593128 CD40LGP29965 261 aa13.88□□□□□ -0.19
CIRBP-243ENST00000593128 LINC00205P59089 165 aa13.88□□□□□ -0.19
CIRBP-243ENST00000593128 MRPS15P82914 257 aaKnown RBP13.88□□□□□ -0.19
CIRBP-243ENST00000593128 TMEM91Q6ZNR0 172 aa13.88□□□□□ -0.19
CIRBP-243ENST00000593128 LFNGQ8NES3 379 aa13.88□□□□□ -0.19
CIRBP-243ENST00000593128 GRPEL2Q8TAA5 225 aa13.88□□□□□ -0.19
CIRBP-243ENST00000593128 PECRQ9BY49 303 aa13.88□□□□□ -0.19
CIRBP-243ENST00000593128 TOLLIPQ9H0E2 274 aa13.88□□□□□ -0.19
CIRBP-243ENST00000593128 Q9N2K0 584 aa13.88□□□□□ -0.19
CIRBP-243ENST00000593128 MGAT4AQ9UM21 535 aa13.88□□□□□ -0.19
CIRBP-243ENST00000593128 TRBV6-6A0A0A6YYG2 114 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 M0R1X1 148 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 RGS10O43665 173 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 RBBP9O75884 186 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 ARL6IP5O75915 188 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 APOA2P02652 100 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 EGR2P11161 476 aaPredicted RBP13.87□□□□□ -0.19
CIRBP-243ENST00000593128 SPNP16150 400 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 IRF3Q14653 427 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 PSG5Q15238 335 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 OVCH2Q7RTZ1 564 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 TCTEX1D1Q8N7M0 179 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 OR5AN1Q8NGI8 311 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 AGMATQ9BSE5 352 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 GHITMQ9H3K2 345 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 RRP15Q9Y3B9 282 aaKnown RBP13.87□□□□□ -0.19
CIRBP-243ENST00000593128 NUBP2Q9Y5Y2 271 aa13.87□□□□□ -0.19
CIRBP-243ENST00000593128 BET1O15155 118 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 SLC25A17O43808 307 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 TRGV3P03979 118 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 IGKV1-16P04430 117 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 TFAP2AP05549 437 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 MAP2K4P45985 399 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 PITPNAQ00169 270 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 TRAM1Q15629 374 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 C19orf54Q5BKX5 351 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 HES5Q5TA89 166 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 PYHIN1Q6K0P9 492 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 ZNF383Q8NA42 475 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 TSNAXQ99598 290 aaKnown RBP13.86□□□□□ -0.19
CIRBP-243ENST00000593128 TPSG1Q9NRR2 321 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 RDH8Q9NYR8 311 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 HSF4Q9ULV5 492 aa13.86□□□□□ -0.19
CIRBP-243ENST00000593128 A0A075B6Q4 140 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 TRDCB7Z8K6 153 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 ITGB1BP1O14713 200 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 DENRO43583 198 aaKnown RBP13.85□□□□□ -0.19
CIRBP-243ENST00000593128 CNIH1O95406 144 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 CD3GP09693 182 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 TMEM50BP56557 158 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 FABP5Q01469 135 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 TPBGQ13641 420 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 C2orf76Q3KRA6 126 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 HAPLN4Q86UW8 402 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 FAM89BQ8N5H3 189 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 OR5T1Q8NG75 326 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 OR56B1Q8NGI3 324 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 OR6Q1Q8NGQ2 317 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 FAM3DQ96BQ1 224 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 RSRP1Q9BUV0 290 aa13.85□□□□□ -0.19
CIRBP-243ENST00000593128 IGKV1-6A0A0C4DH72 117 aa13.84□□□□□ -0.19
CIRBP-243ENST00000593128 HSPB1P04792 205 aaKnown RBP13.84□□□□□ -0.19
CIRBP-243ENST00000593128 PSMA1P25786 263 aaKnown RBP13.84□□□□□ -0.19
CIRBP-243ENST00000593128 CRIP2P52943 208 aaPredicted RBP13.84□□□□□ -0.19
CIRBP-243ENST00000593128 PLA2G7Q13093 441 aa13.84□□□□□ -0.19
CIRBP-243ENST00000593128 FXYD3Q14802 87 aa13.84□□□□□ -0.19
CIRBP-243ENST00000593128 SRSF7Q16629 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
CIRBP-243ENST00000593128 AKIRIN2Q53H80 203 aa13.84□□□□□ -0.19
CIRBP-243ENST00000593128 PLAC9Q5JTB6 97 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms