RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 IGLV1-40P01703 118 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 SLURP1P55000 103 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 GABARAPL2P60520 117 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 GNMTQ14749 295 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 ACSM6Q6P461 480 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 TMEM65Q6PI78 240 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 OR56B1Q8NGI3 324 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 GFI1Q99684 422 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 ZNF107Q9UII5 783 aaPredicted RBP13.36□□□□□ -0.27
RETREG3-210ENST00000590541 TRAV1-2A0A0B4J238 106 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 G3V318 75 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 MAP2K4P45985 399 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 P2RY14Q15391 338 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 CD200R1LQ6Q8B3 271 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 ZNF833PQ6ZTB9 187 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 ODF3L1Q8IXM7 274 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 IL1F10Q8WWZ1 152 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 EDARADDQ8WWZ3 215 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 FAM3DQ96BQ1 224 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 OR51J1Q9H342 316 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 Q9H521 79 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 C12orf4Q9NQ89 552 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 NDUFB11Q9NX14 153 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 WSB1Q9Y6I7 421 aa13.35□□□□□ -0.27
RETREG3-210ENST00000590541 HERC2O95714 4834 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 A0A0A6YYD4 124 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 RAB29O14966 203 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 SOCS1O15524 211 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 ZBTB25P24278 435 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 RAB9AP51151 201 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 C2orf76Q3KRA6 126 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 ARPC1AQ92747 370 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 NABP2Q9BQ15 211 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 SPATA25Q9BR10 227 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 YTHDF1Q9BYJ9 559 aaKnown RBP13.34□□□□□ -0.27
RETREG3-210ENST00000590541 KCNK15Q9H427 330 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 TPSG1Q9NRR2 321 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 SLC23A1Q9UHI7 598 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 AK3Q9UIJ7 227 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 RAB22AQ9UL26 194 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 ALMS1Q8TCU4 4167 aa13.34□□□□□ -0.27
RETREG3-210ENST00000590541 FOXI3A8MTJ6 420 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-210ENST00000590541 LINC01619G3V211 115 aa13.33□□□□□ -0.28
RETREG3-210ENST00000590541 DENRO43583 198 aaKnown RBP13.33□□□□□ -0.28
RETREG3-210ENST00000590541 ATP6V1G2O95670 118 aa13.33□□□□□ -0.28
RETREG3-210ENST00000590541 SLC2A2P11168 524 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-210ENST00000590541 MYL9P24844 172 aa13.33□□□□□ -0.28
RETREG3-210ENST00000590541 MMDQ15546 238 aa13.33□□□□□ -0.28
RETREG3-210ENST00000590541 SSX1Q16384 188 aa13.33□□□□□ -0.28
RETREG3-210ENST00000590541 SETD6Q8TBK2 473 aa13.33□□□□□ -0.28
RETREG3-210ENST00000590541 ZNF251Q9BRH9 671 aa13.33□□□□□ -0.28
RETREG3-210ENST00000590541 SAA2-SAA4A0A096LPE2 208 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 TRDV1A0A1B0GX56 115 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 ATP6V0E1O15342 81 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 OR8U9P0C7N5 309 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 SAA2P0DJI9 122 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-210ENST00000590541 MC5RP33032 325 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 TMEM50BP56557 158 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 ACTBP60709 375 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 HLA-DRB3P79483 266 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 MRPS15P82914 257 aaKnown RBP13.32□□□□□ -0.28
RETREG3-210ENST00000590541 HAPLN4Q86UW8 402 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 FCGR1BQ92637 280 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 CMSS1Q9BQ75 279 aaKnown RBP13.32□□□□□ -0.28
RETREG3-210ENST00000590541 CENPOQ9BU64 300 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 PECRQ9BY49 303 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 MRPL20Q9BYC9 149 aaKnown RBP13.32□□□□□ -0.28
RETREG3-210ENST00000590541 TOLLIPQ9H0E2 274 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 IFI27L2Q9H2X8 130 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 Q9N2K0 584 aa13.32□□□□□ -0.28
RETREG3-210ENST00000590541 IGHV4OR15-8A0A075B7B6 117 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 A0A087WW49 117 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 OR5H14A6NHG9 310 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 HSPA12AO43301 675 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 GADD45AP24522 165 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 HAGHQ16775 308 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 MINDY2Q8NBR6 621 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 NPBQ8NG41 125 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 PTX4Q96A99 478 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 ARHGAP5-AS1Q96IT6 56 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 CYYR1Q96J86 154 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 KIAA1456Q9P272 454 aa13.31□□□□□ -0.28
RETREG3-210ENST00000590541 TMEM272A0A1B0GTI8 110 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 IFITM5A6NNB3 132 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 NBR2O15453 112 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 RBBP9O75884 186 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 DIRAS3O95661 229 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 HLA-DRB1P01911 266 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 RAB3BP20337 219 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 RAB6AP20340 208 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 CEACAM6P40199 344 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 OR3A3P47888 321 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 SERPINB10P48595 397 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 CLDN12P56749 244 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 UBE2UQ5VVX9 321 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 C5orf24Q7Z6I8 188 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 SGPP2Q8IWX5 399 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 RAB3CQ96E17 227 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 OR4C12Q96R67 309 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 RNF5Q99942 180 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms