RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 DPM3Q9P2X0 92 aa11.79□□□□□ -0.52
NPLOC4-207ENST00000572346 ANXA10Q9UJ72 324 aa11.79□□□□□ -0.52
NPLOC4-207ENST00000572346 BUB1B-PAK6H3BSN5 160 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 K7EIL1 84 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 IGLV1-47P01700 117 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 MRPS10P82664 201 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 SPANXN2Q5MJ10 180 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 C16orf82Q7Z2V1 217 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 CENPVQ7Z7K6 275 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 LINC00311Q8N616 119 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 FCAMRQ8WWV6 532 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 EDARADDQ8WWZ3 215 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 RPEQ96AT9 228 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 ABHD1Q96SE0 405 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 CABLES2Q9BTV7 478 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 ABHD14AQ9BUJ0 271 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 OR1A1Q9P1Q5 309 aa11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 RBM7Q9Y580 266 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-207ENST00000572346 TRBV6-7A0A0A0MS04 114 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 IGKV1-6A0A0C4DH72 117 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 SLC31A2O15432 143 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 RBBP9O75884 186 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 DIRAS3O95661 229 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 PF4P02776 101 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 CD24P25063 80 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 OR3A3P47888 321 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 ARHGDIBP52566 201 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 CT45A1Q5HYN5 189 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 LY6G6FQ5SQ64 297 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 SLC25A48Q6ZT89 311 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 C8orf31Q8N9H6 132 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 OR6Q1Q8NGQ2 317 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 OR52I2Q8NH67 350 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 CT45A3Q8NHU0 189 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 AKR1E2Q96JD6 320 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 RDH8Q9NYR8 311 aa11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 TSSC4Q9Y5U2 329 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-207ENST00000572346 TCRBV4S1A1TA0A5B7 111 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 GABARAPH6UMI1 98 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 ST8SIA5O15466 376 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 RCVRNP35243 200 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 RAB7AP51149 207 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 ZNF134P52741 427 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 TAS2R46P59540 309 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 ACTBP60709 375 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 ABCA11PQ4W5N1 156 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 PYDC2Q56P42 97 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 VAX1Q5SQQ9 334 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 ZNF439Q8NDP4 499 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 OR5AP2Q8NGF4 316 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 OR5H2Q8NGV7 314 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 TOMM40LQ969M1 308 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 SLC25A33Q9BSK2 321 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 C11orf54Q9H0W9 315 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 NBEAL2Q6ZNJ1 2754 aa11.76□□□□□ -0.53
NPLOC4-207ENST00000572346 CTDSPLO15194 276 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 HLA-DMAP28067 261 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 BRS3P32247 399 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 DGCR2P98153 550 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 CDK10Q15131 360 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 TPTE2P1Q5T6R2 138 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 CCDC144NLQ6NUI1 221 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 OR4X2Q8NGF9 303 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 CAPSLQ8WWF8 208 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 RCC1LQ96I51 464 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 EHFQ9NZC4 300 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 RNF150Q9ULK6 438 aa11.75□□□□□ -0.53
NPLOC4-207ENST00000572346 OOSP1A8MZH6 123 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 J3QRK9 145 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 ITGB1BP1O14713 200 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 HSD17B6O14756 317 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 OR2F2O95006 317 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 PMP2P02689 132 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 GAPDHP04406 335 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 AMY1AP04745 511 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 AMY2AP04746 511 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 OR5H8P0DN80 308 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 NAT1P18440 290 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 NFYAP23511 347 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 KRTAP10-11P60412 298 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 C11orf87Q6NUJ2 197 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 CCDC190Q86UF4 302 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 H1FOOQ8IZA3 346 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 SMIM4Q8WVI0 70 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 SNAPC3Q92966 411 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 RBM14Q96PK6 669 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 S1PR3Q99500 378 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 PARP12Q9H0J9 701 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 GHITMQ9H3K2 345 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 PTTG2Q9NZH5 202 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 PIPOXQ9P0Z9 390 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 KLK11Q9UBX7 282 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 MTFP1Q9UDX5 166 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 ZNF221Q9UK13 617 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 ANAPC10Q9UM13 185 aa11.74□□□□□ -0.53
NPLOC4-207ENST00000572346 COL7A1Q02388 2944 aa11.73□□□□□ -0.53
NPLOC4-207ENST00000572346 WI2-2373I1.2A0A1W2PRP0 233 aa11.73□□□□□ -0.53
NPLOC4-207ENST00000572346 SH2D7A6NKC9 451 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms