RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PRRT1Q99946 306 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 RANBP3Q9H6Z4 567 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-225ENST00000569245 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 MCUBQ9NWR8 336 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 EHFQ9NZC4 300 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 MGAM2Q2M2H8 2515 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 TRRAPQ9Y4A5 3859 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 A0A087X0M5 115 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 TRBV6-7A0A0A0MS04 114 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 FAM240BA0A1B0GVZ2 78 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 A0A1B0GX30 115 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 BUB1B-PAK6H3BSN5 160 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 M0QZ24 198 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 SPINT2O43291 252 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 IGLV1-47P01700 117 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 HBZP02008 142 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 CD34P28906 385 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 BRS3P32247 399 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 SSTR5P35346 364 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 HTD2P86397 168 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 OXA1LQ15070 435 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 IGSF11Q5DX21 431 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 ARSJQ5FYB0 599 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-225ENST00000569245 ZNF660Q6AZW8 331 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-225ENST00000569245 TREML4Q6UXN2 200 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 C5orf24Q7Z6I8 188 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 NRARPQ7Z6K4 114 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 TMEM17Q86X19 198 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 MINDY2Q8NBR6 621 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 DUSP18Q8NEJ0 188 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 OR51S1Q8NGJ8 323 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 OR56B4Q8NH76 319 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 CAPSLQ8WWF8 208 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 GIMAP1Q8WWP7 306 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 ARL11Q969Q4 196 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 GALMQ96C23 342 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 TOLLIPQ9H0E2 274 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 SCP2D1Q9UJQ7 156 aa11.63□□□□□ -0.55
COMMD4-225ENST00000569245 SDCBPO00560 298 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-225ENST00000569245 PEX14O75381 377 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 VSIG10L2P0DP72 767 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 CD24P25063 80 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 GNG10P50151 68 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 TSPAN5P62079 268 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 HLA-DRB5Q30154 266 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 TMEM30BQ3MIR4 351 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 UTF1Q5T230 341 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 TPTE2P1Q5T6R2 138 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 CCDC144NLQ6NUI1 221 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 C11orf88Q6PI97 169 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 LHFPL1Q86WI0 220 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 OR10A7Q8NGE5 316 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 OR1L1Q8NH94 360 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 ENKURQ8TC29 256 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 CHPT1Q8WUD6 406 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 RPEQ96AT9 228 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 PRSS22Q9GZN4 317 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 MMP28Q9H239 520 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 COPZ2Q9P299 210 aa11.62□□□□□ -0.55
COMMD4-225ENST00000569245 AMMECR1Q9Y4X0 333 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-225ENST00000569245 J3QR06 171 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 TUSC2O75896 110 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 IDO2Q6ZQW0 420 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 H1FOOQ8IZA3 346 aaPredicted RBP11.61□□□□□ -0.55
COMMD4-225ENST00000569245 PRR18Q8N4B5 295 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 OR52M1Q8NGK5 317 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 OR10X1Q8NGY0 326 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 OR6F1Q8NGZ6 308 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 OR10J5Q8NHC4 309 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 TERB2Q8NHR7 220 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 UBALD1Q8TB05 177 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 SLC25A21Q9BQT8 299 aaPredicted RBP11.61□□□□□ -0.55
COMMD4-225ENST00000569245 JPT1Q9UK76 154 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 PSG11Q9UQ72 335 aa11.61□□□□□ -0.55
COMMD4-225ENST00000569245 BET1O15155 118 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 NDUFB6O95139 128 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 TCRBP04435 133 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 ZBTB25P24278 435 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 FCGR2CP31995 323 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 ECI1P42126 302 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 CCR6P51684 374 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 LOXL3P58215 753 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 HABP2Q14520 560 aaPredicted RBP11.6□□□□□ -0.55
COMMD4-225ENST00000569245 RBMS2Q15434 407 aaKnown RBP11.6□□□□□ -0.55
COMMD4-225ENST00000569245 SCGB2B2Q4G0G5 96 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 LY6G6FQ5SQ64 297 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 C11orf44Q8N8P7 122 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 OR13C8Q8NGS7 320 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 IL1F10Q8WWZ1 152 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 TOMM40LQ969M1 308 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 AKR1E2Q96JD6 320 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 GINS4Q9BRT9 223 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 ZNF2Q9BSG1 426 aaPredicted RBP11.6□□□□□ -0.55
COMMD4-225ENST00000569245 ZNF702PQ9H963 129 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 SLC23A1Q9UHI7 598 aa11.6□□□□□ -0.55
COMMD4-225ENST00000569245 A0A1W2PPE3 182 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 OOSP1A8MZH6 123 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 LY6LH3BQJ8 138 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 HSPA12AO43301 675 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms