RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 LIN7CQ9NUP9 197 aaKnown RBP17.15■□□□□ 0.34
NME3-210ENST00000567271 FBN3Q75N90 2809 aa17.15■□□□□ 0.34
NME3-210ENST00000567271 OR5H14A6NHG9 310 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 H0YJW9 148 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 MC5RP33032 325 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 CBX5P45973 191 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 TMBIM6P55061 237 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 ACTBP60709 375 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 SPCS2Q15005 226 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 FAM131AQ6UXB0 335 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 FAM71E2Q8N5Q1 922 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 DRAXINQ8NBI3 349 aaPredicted RBP17.14■□□□□ 0.33
NME3-210ENST00000567271 RAB2BQ8WUD1 216 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 AP3S1Q92572 193 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 RASL11BQ9BPW5 248 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 OR2D2Q9H210 308 aa17.14■□□□□ 0.33
NME3-210ENST00000567271 HPGDSO60760 199 aa17.13■□□□□ 0.33
NME3-210ENST00000567271 IGHG2P01859 326 aa17.13■□□□□ 0.33
NME3-210ENST00000567271 HIST2H2BDQ6DRA6 164 aa17.13■□□□□ 0.33
NME3-210ENST00000567271 MZT2AQ6P582 158 aa17.13■□□□□ 0.33
NME3-210ENST00000567271 CENPVQ7Z7K6 275 aaPredicted RBP17.13■□□□□ 0.33
NME3-210ENST00000567271 ZNF383Q8NA42 475 aa17.13■□□□□ 0.33
NME3-210ENST00000567271 BCL7BQ9BQE9 202 aa17.13■□□□□ 0.33
NME3-210ENST00000567271 SDHAF2Q9NX18 166 aa17.13■□□□□ 0.33
NME3-210ENST00000567271 RBM7Q9Y580 266 aaKnown RBP17.13■□□□□ 0.33
NME3-210ENST00000567271 PKD1L1Q8TDX9 2849 aa17.13■□□□□ 0.33
NME3-210ENST00000567271 M0QZ24 198 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 M0R1X1 148 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 FBXO24O75426 580 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 CD28P10747 220 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 ELK1P19419 428 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 NFYAP23511 347 aaPredicted RBP17.12■□□□□ 0.33
NME3-210ENST00000567271 LINC00205P59089 165 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 MMDQ15546 238 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 OR5AU1Q8NGC0 362 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 SCOCQ9UIL1 159 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 WASHC3Q9Y3C0 194 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 OR2W1Q9Y3N9 320 aa17.12■□□□□ 0.33
NME3-210ENST00000567271 SMIM31A0A1B0GVY4 71 aa17.11■□□□□ 0.33
NME3-210ENST00000567271 LINC01548A6NM66 108 aa17.11■□□□□ 0.33
NME3-210ENST00000567271 HLA-DQB1P01920 261 aa17.11■□□□□ 0.33
NME3-210ENST00000567271 CNTFRP26992 372 aa17.11■□□□□ 0.33
NME3-210ENST00000567271 ARPC4P59998 168 aa17.11■□□□□ 0.33
NME3-210ENST00000567271 SLC35E3Q7Z769 313 aa17.11■□□□□ 0.33
NME3-210ENST00000567271 NPBQ8NG41 125 aa17.11■□□□□ 0.33
NME3-210ENST00000567271 SNAPC3Q92966 411 aa17.11■□□□□ 0.33
NME3-210ENST00000567271 C5orf30Q96GV9 206 aa17.11■□□□□ 0.33
NME3-210ENST00000567271 MEIS3P1A6NDR6 274 aa17.1■□□□□ 0.33
NME3-210ENST00000567271 H7C2Y5 167 aa17.1■□□□□ 0.33
NME3-210ENST00000567271 NBR2O15453 112 aa17.1■□□□□ 0.33
NME3-210ENST00000567271 FCER2P06734 321 aa17.1■□□□□ 0.33
NME3-210ENST00000567271 PRSS3P35030 304 aa17.1■□□□□ 0.33
NME3-210ENST00000567271 RNF5Q99942 180 aa17.1■□□□□ 0.33
NME3-210ENST00000567271 MRPS7Q9Y2R9 242 aaKnown RBP17.1■□□□□ 0.33
NME3-210ENST00000567271 MGAM2Q2M2H8 2515 aa17.1■□□□□ 0.33
NME3-210ENST00000567271 J3QRK9 145 aa17.09■□□□□ 0.33
NME3-210ENST00000567271 RBBP9O75884 186 aa17.09■□□□□ 0.33
NME3-210ENST00000567271 TUSC2O75896 110 aa17.09■□□□□ 0.33
NME3-210ENST00000567271 NDUFA3O95167 84 aa17.09■□□□□ 0.33
NME3-210ENST00000567271 SOX6P35712 828 aa17.09■□□□□ 0.33
NME3-210ENST00000567271 LUMP51884 338 aaPredicted RBP17.09■□□□□ 0.33
NME3-210ENST00000567271 NOL4LQ96MY1 436 aaPredicted RBP17.09■□□□□ 0.33
NME3-210ENST00000567271 NECAP2Q9NVZ3 263 aa17.09■□□□□ 0.33
NME3-210ENST00000567271 ANAPC10Q9UM13 185 aa17.09■□□□□ 0.33
NME3-210ENST00000567271 VWFP04275 2813 aa17.08■□□□□ 0.33
NME3-210ENST00000567271 KCNAB3O43448 404 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 APOA2P02652 100 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 C5orf64Q2M2E5 130 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 C2orf68Q2NKX9 166 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 C10orf99Q6UWK7 81 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 PDPNQ86YL7 162 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 FOXRED2Q8IWF2 684 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 ZNF645Q8N7E2 425 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 OR5AP2Q8NGF4 316 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 CHPT1Q8WUD6 406 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 CITED2Q99967 270 aaPredicted RBP17.08■□□□□ 0.32
NME3-210ENST00000567271 HSPB9Q9BQS6 159 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 IFT46Q9NQC8 304 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 KIAA1456Q9P272 454 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 NBEAL1Q6ZS30 2694 aa17.08■□□□□ 0.32
NME3-210ENST00000567271 TET2Q6N021 2002 aaPredicted RBP17.08■□□□□ 0.32
NME3-210ENST00000567271 IGKV1D-13A0A0B4J2D9 117 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 PSMB11A5LHX3 300 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 FAM25AB3EWG3 89 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 FAM25CB3EWG5 89 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 FAM25GB3EWG6 89 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 IGKV1-16P04430 117 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 IGKV1-13P0DP09 117 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 NAT1P18440 290 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 THBS3P49746 956 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 CD83Q01151 205 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 TCTEX1D4Q5JR98 221 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 TREML4Q6UXN2 200 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 DYNC2LI1Q8TCX1 351 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 ISOC1Q96CN7 298 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 ZNF107Q9UII5 783 aaPredicted RBP17.07■□□□□ 0.32
NME3-210ENST00000567271 LINC00527Q9UJ94 153 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 WNK1Q9H4A3 2382 aa17.07■□□□□ 0.32
NME3-210ENST00000567271 H3BMQ9 156 aa17.06■□□□□ 0.32
NME3-210ENST00000567271 AP4M1O00189 453 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 319.2 ms