RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PLPPR1Q8TBJ4 325 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 ANGPTL7O43827 346 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 WNT5AP41221 380 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 PAX9P55771 341 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 PPP1CBP62140 327 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 BATFQ16520 125 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 TMEM144Q7Z5S9 345 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 TMEM251Q8N6I4 163 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 CPEB3Q8NE35 698 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 MRGPRDQ8TDS7 321 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 PARLQ9H300 379 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 SLC7A10Q9NS82 523 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 MED13Q9UHV7 2174 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 FREM2Q5SZK8 3169 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 KNTC1P50748 2209 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 SPRY1O43609 319 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 LILRA1O75019 489 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 NRASP01111 189 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 GYPAP02724 150 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 IL3RAP26951 378 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 FGF8P55075 233 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 ARF1P84077 181 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 ASCL4Q6XD76 172 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 LHFPL2Q6ZUX7 228 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 TBC1D26Q86UD7 250 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 TIMM9Q9Y5J7 89 aa11.85□□□□□ -0.51
RABGGTA-220ENST00000560998 PTTG1IPP53801 180 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 PLGLB1Q02325 96 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 LRRC75BQ2VPJ9 315 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 TMEM211Q6ICI0 200 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 TUSC5Q8IXB3 177 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 TMEM256Q8N2U0 113 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 OR5D13Q8NGL4 314 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 MRPL30Q8TCC3 161 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 RPUSD4Q96CM3 377 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 BORCS8Q96FH0 119 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 RSG1Q9BU20 258 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 C1QTNF5Q9BXJ0 243 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 PRDM14Q9GZV8 571 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 SLC45A2Q9UMX9 530 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 WIPI2Q9Y4P8 454 aa11.84□□□□□ -0.51
RABGGTA-220ENST00000560998 TOMM40O96008 361 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 PPBPP02775 128 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 SP1P08047 785 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 HBG1P69891 147 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 HBG2P69892 147 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 FOXL1Q12952 345 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 Q6ZWC4 215 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 MDS2Q8NDY4 140 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 LHX4Q969G2 390 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 SPSB4Q96A44 273 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 FER1L6-AS2Q96M78 137 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 CIB3Q96Q77 187 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 CHODLQ9H9P2 273 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 FREM1Q5H8C1 2179 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 MEOX1P50221 254 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 FUT6P51993 359 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 YPEL3P61236 119 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 ATP6V1FQ16864 119 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 CST9LP1Q5W188 147 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 Q6ZS49 121 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 COLCA1Q6ZS62 124 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 SLC39A9Q9NUM3 307 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 KLF13Q9Y2Y9 288 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
RABGGTA-220ENST00000560998 IGKV1-12A0A0C4DH73 117 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF816-ZNF321PA0A0X1KG74 233 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 A8MXE2 369 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 CNOT4O95628 575 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 IGKV1D-12P01611 117 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 GNRHRP30968 328 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 RTP5Q14D33 572 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 SMIM15Q7Z3B0 74 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF525Q8N782 197 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 VSIRQ9H7M9 311 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 IL36GQ9NZH8 169 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF581Q9P0T4 197 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 UQCR10Q9UDW1 63 aa11.82□□□□□ -0.52
RABGGTA-220ENST00000560998 H0Y980 276 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 IFNL4K9M1U5 179 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 HS3ST1O14792 307 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 MLNRO43193 412 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 HNF1AP20823 631 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 GCH1P30793 250 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 FOXG1P55316 489 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 UBE2V1Q13404 147 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 SRSF7Q16629 238 aaKnown RBP eCLIP11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 C9orf135Q5VTT2 229 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 PLCXD3Q63HM9 321 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 PIGCQ92535 297 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 PRRG4Q9BZD6 226 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 TAAR3PQ9P1P4 343 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF407Q9C0G0 2248 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 TRAV9-1A0A075B6T8 112 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 A0A096LPE4 126 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 A0A0U1RQK1 487 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 A0A1W2PPZ6 126 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF320A2RRD8 509 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 CCL25O15444 150 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms