RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 TRAV8-2A0A0B4J237 113 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 TRAV26-2A0A0B4J265 109 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 FAM236DA0A1B0GTK5 79 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 B4DEV8 164 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 TMEM262E9PQX1 116 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 FNDC10F2Z333 226 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 K7EMT4 169 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 K7EQS6 105 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 RHODO00212 210 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 BCL2L11O43521 198 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 FGF17O60258 216 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 FAM20BO75063 409 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 ARL6IP5O75915 188 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 ZNF682O95780 498 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 KRASP01116 189 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 IGHMP01871 453 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 MMP7P09237 267 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 P0DMU3 169 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 FAM231AP0DMU4 169 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 FAM231CP0DMU5 169 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 FAM236CP0DP71 79 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 CRYBB3P26998 211 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 ATP4BP51164 291 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 SEC61A1P61619 476 aaKnown RBP3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 DAD1P61803 113 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 SNRPD2P62316 118 aaKnown RBP3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 HBG1P69891 147 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 HBG2P69892 147 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 PRDX1Q06830 199 aaKnown RBP3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 ARFRP1Q13795 201 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 Q499Y3 187 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 SPATA31B1PQ5VZV4 182 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 PVRIGQ6DKI7 326 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 ZNF549Q6P9A3 640 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 PARM1Q6UWI2 310 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 ZNF730Q6ZMV8 503 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 TMEM183AQ8IXX5 376 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 ZNF440Q8IYI8 595 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 PRR22Q8IZ63 422 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 CIARTQ8N365 385 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 SLC25A45Q8N413 288 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 RNF175Q8N4F7 328 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 DEFB125Q8N687 156 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 ZFP62Q8NB50 900 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 OR4B1Q8NGF8 309 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 OR8B12Q8NGG6 310 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 NEIL3Q8TAT5 605 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 COPS9Q8WXC6 57 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 IP6K3Q96PC2 410 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 SPRY4Q9C004 299 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 WDR61Q9GZS3 305 aaKnown RBP3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 ATG5Q9H1Y0 275 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 LIME1Q9H400 295 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 DUSP21Q9H596 190 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 JPT2Q9H910 190 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 EXOSC3Q9NQT5 275 aaKnown RBP3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 TMEM45AQ9NWC5 275 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 C19orf25Q9UFG5 118 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 PKIGQ9Y2B9 76 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 INSIG2Q9Y5U4 225 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 USP6P35125 1406 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 A2ML1A8K2U0 1454 aa3.67□□□□□ -1.82
HMGB3P26-201ENST00000560051 MYH6P13533 1939 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 PLIN4Q96Q06 1357 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 DISP1Q96F81 1524 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 FRMPD3Q5JV73 1810 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 TRGV11A0A075B6L2 103 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 LOC102725191A0A1B0GVB3 256 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 C7orf71A4D174 169 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 IFITM10A6NMD0 228 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 C11orf98E9PRG8 122 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 RER1O15258 196 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 GABARAPO95166 117 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 DUS4LO95620 317 aaKnown RBP3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 WNT1P04628 370 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 REG1AP05451 166 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 ATP5G1P05496 136 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 HOXB7P09629 217 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 SPINK8P0C7L1 97 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 ZNF728P0DKX0 622 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 CPMP14384 443 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 GABRG2P18507 467 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 GPD1P21695 349 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 PPIBP23284 216 aaKnown RBP3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 PRSS3P35030 304 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 PPICP45877 212 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 ATP5G3P48201 142 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 DIO3P55073 304 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 ARPP19P56211 112 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 OR1D5P58170 312 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 RPS24P62847 133 aaKnown RBP3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 COL10A1Q03692 680 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 ZNF92Q03936 586 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 ATP5G2Q06055 141 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 KLRD1Q13241 179 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 RIGQ13278 110 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 C1DQ13901 141 aaKnown RBP3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 HES1Q14469 280 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 MMDQ15546 238 aa3.66□□□□□ -1.82
HMGB3P26-201ENST00000560051 TRIP6Q15654 476 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms