RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 CLDN18P56856 261 aa14.79□□□□□ -0.04
SYNE3-202ENST00000553340 SLC10A1Q14973 349 aa14.79□□□□□ -0.04
SYNE3-202ENST00000553340 MYPOPQ86VE0 399 aaPredicted RBP14.79□□□□□ -0.04
SYNE3-202ENST00000553340 Q8IYB0 196 aa14.79□□□□□ -0.04
SYNE3-202ENST00000553340 ZNF709Q8N972 641 aa14.79□□□□□ -0.04
SYNE3-202ENST00000553340 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.79□□□□□ -0.04
SYNE3-202ENST00000553340 CLN8Q9UBY8 286 aa14.79□□□□□ -0.04
SYNE3-202ENST00000553340 LRRC30A6NM36 301 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 CFIP05156 583 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 CCKARP32238 428 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 G6PCP35575 357 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 DDA1Q9BW61 102 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 RTL8AQ9BWD3 113 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 WIPI2Q9Y4P8 454 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 RAMP3O60896 148 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 IL18BPO95998 194 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 SNRPCP09234 159 aaKnown RBP14.78□□□□□ -0.04
SYNE3-202ENST00000553340 IGFBP7Q16270 282 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 MRPL41Q8IXM3 137 aaKnown RBP14.78□□□□□ -0.04
SYNE3-202ENST00000553340 ZBTB34Q8NCN2 500 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 NPCDR1Q9BY65 106 aa14.78□□□□□ -0.04
SYNE3-202ENST00000553340 CELA3AP09093 270 aa14.77□□□□□ -0.04
SYNE3-202ENST00000553340 PMP22Q01453 160 aa14.77□□□□□ -0.04
SYNE3-202ENST00000553340 ZNF645Q8N7E2 425 aa14.77□□□□□ -0.04
SYNE3-202ENST00000553340 ZNF703Q9H7S9 590 aaPredicted RBP14.77□□□□□ -0.04
SYNE3-202ENST00000553340 B4GALT7Q9UBV7 327 aa14.77□□□□□ -0.04
SYNE3-202ENST00000553340 POLDIP2Q9Y2S7 368 aa14.77□□□□□ -0.04
SYNE3-202ENST00000553340 PMS2P5A8MQ11 134 aa14.77□□□□□ -0.05
SYNE3-202ENST00000553340 DUSP3P51452 185 aaPredicted RBP14.77□□□□□ -0.05
SYNE3-202ENST00000553340 LCN2P80188 198 aa14.77□□□□□ -0.05
SYNE3-202ENST00000553340 TFF3Q07654 80 aa14.77□□□□□ -0.05
SYNE3-202ENST00000553340 IQCJQ1A5X6 159 aa14.77□□□□□ -0.05
SYNE3-202ENST00000553340 FAM173AQ9BQD7 235 aa14.77□□□□□ -0.05
SYNE3-202ENST00000553340 ODAMA1E959 279 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 C11orf94C9JXX5 98 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 CNN1P51911 297 aaKnown RBP14.76□□□□□ -0.05
SYNE3-202ENST00000553340 SPCS3P61009 180 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 RAB4BP61018 213 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 ZNF816Q0VGE8 651 aaPredicted RBP14.76□□□□□ -0.05
SYNE3-202ENST00000553340 SPATA46Q5T0L3 261 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 PMS2CLQ68D20 193 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 OR2M7Q8NG81 312 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 DTD1Q8TEA8 209 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 MRPL37Q9BZE1 423 aaKnown RBP14.76□□□□□ -0.05
SYNE3-202ENST00000553340 KCNIP1Q9NZI2 227 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 SH2D1BO14796 132 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 P0C879 139 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 GNB2P62879 340 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 SSPNQ14714 243 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 TGIF2LXQ8IUE1 241 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 SCCPDHQ8NBX0 429 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 OR5T1Q8NG75 326 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 CIB3Q96Q77 187 aaPredicted RBP14.76□□□□□ -0.05
SYNE3-202ENST00000553340 OR2D2Q9H210 308 aa14.76□□□□□ -0.05
SYNE3-202ENST00000553340 C17orf112F2Z3M2 114 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 ZG16O60844 167 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 NXPH2O95156 264 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 RAC2P15153 192 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 CHRNA7P36544 502 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 ERVK11-1P61568 191 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 PAX5Q02548 391 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 CATR1Q13166 79 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 MT-CO3P00414 261 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 WDR86Q86TI4 376 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 BTF3L4Q96K17 158 aa14.75□□□□□ -0.05
SYNE3-202ENST00000553340 ARHGAP21Q5T5U3 1957 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 DIDO1Q9BTC0 2240 aaKnown RBP14.74□□□□□ -0.05
SYNE3-202ENST00000553340 C1QTNF9BB2RNN3 333 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 CDC34P49427 236 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-202ENST00000553340 ZNF146Q15072 292 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 ZNF124Q15973 351 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 VWC2Q2TAL6 325 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 FAM78BQ5VT40 261 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 GBGT1Q8N5D6 347 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 GALMQ96C23 342 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 MED12LQ86YW9 2145 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 S1PR2O95136 353 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 PDGFBP01127 241 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-202ENST00000553340 CD99P14209 185 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 NPPCP23582 126 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 RPL30P62888 115 aaKnown RBP14.74□□□□□ -0.05
SYNE3-202ENST00000553340 MCEMP1Q8IX19 187 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 ZNF808Q8N4W9 903 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-202ENST00000553340 OR1L1Q8NH94 360 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 THOC3Q96J01 351 aaKnown RBP14.74□□□□□ -0.05
SYNE3-202ENST00000553340 SIT1Q9Y3P8 196 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 R4GN57 208 aa14.74□□□□□ -0.05
SYNE3-202ENST00000553340 TCAPO15273 167 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 MLNRO43193 412 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 PDE6DO43924 150 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 IL3RAP26951 378 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 RPS16P62249 146 aaKnown RBP14.73□□□□□ -0.05
SYNE3-202ENST00000553340 PRSS8Q16651 343 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 DCAF12Q5T6F0 453 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 NUFIP2Q7Z417 695 aaKnown RBP14.73□□□□□ -0.05
SYNE3-202ENST00000553340 LINC01551Q86U37 167 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 ZDHHC16Q969W1 377 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 FAM166BA8MTA8 275 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 CDIPTO14735 213 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 RBMXL2O75526 392 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms