RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 GABARAPL1Q9H0R8 117 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 BANF2Q9H503 90 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 TMEM138Q9NPI0 162 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 PAK1IP1Q9NWT1 392 aaPredicted RBP9.62□□□□□ -0.87
VPS29-211ENST00000553128 COA4Q9NYJ1 87 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 KCNIP1Q9NZI2 227 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 PIPOXQ9P0Z9 390 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 EXOGQ9Y2C4 368 aaKnown RBP9.62□□□□□ -0.87
VPS29-211ENST00000553128 C2orf70A6NJV1 201 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 RAB29O14966 203 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 SPRY2O43597 315 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 ZNF780AO75290 641 aaPredicted RBP9.61□□□□□ -0.87
VPS29-211ENST00000553128 HLA-AP01891 365 aaKnown RBP9.61□□□□□ -0.87
VPS29-211ENST00000553128 PRH1P02810 166 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 BDKRB2P30411 391 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 MC5RP33032 325 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 RPS16P62249 146 aaKnown RBP9.61□□□□□ -0.87
VPS29-211ENST00000553128 C6orf141Q5SZD1 244 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 XAF1Q6GPH4 301 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 SLC16A13Q7RTY0 426 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 TMEM61Q8N0U2 210 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 ZNF383Q8NA42 475 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 IL1F10Q8WWZ1 152 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 GALMQ96C23 342 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 USMG5Q96IX5 58 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 ZNF184Q99676 751 aaPredicted RBP9.61□□□□□ -0.87
VPS29-211ENST00000553128 RNF5Q99942 180 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 AGMATQ9BSE5 352 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 GABARAPL3Q9BY60 117 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 ENOPH1Q9UHY7 261 aa9.61□□□□□ -0.87
VPS29-211ENST00000553128 ZNF230Q9UIE0 474 aaPredicted RBP9.61□□□□□ -0.87
VPS29-211ENST00000553128 A0A0B4J203 849 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 CA11O75493 328 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 IGLV2-23P01705 113 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 CPEP16870 476 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 BMI1P35226 326 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 HMGN3Q15651 99 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 ATP6AP1Q15904 470 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 GLIPR1L1Q6UWM5 242 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 ZNF554Q86TJ5 538 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 SYS1Q8N2H4 156 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 OR13C5Q8NGS8 318 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 KCNG3Q8TAE7 436 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 MUL1Q969V5 352 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 OR14A2Q96R54 314 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 TSNAXQ99598 290 aaKnown RBP9.6□□□□□ -0.87
VPS29-211ENST00000553128 SELENOIQ9C0D9 397 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 AKIP1Q9NQ31 210 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 GMPPBQ9Y5P6 360 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 DMRT1Q9Y5R6 373 aa9.6□□□□□ -0.87
VPS29-211ENST00000553128 PPP5D1E7EU14 171 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 SPDEFO95238 335 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 CRYGBP07316 175 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 ATF4P18848 351 aaPredicted RBP9.59□□□□□ -0.87
VPS29-211ENST00000553128 FUT3P21217 361 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 CALB2P22676 271 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 LGALS7P47929 136 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 PPP3R1P63098 170 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 ZNF45Q02386 682 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 EXOSC2Q13868 293 aaKnown RBP9.59□□□□□ -0.87
VPS29-211ENST00000553128 MRGPRG-AS1Q2M3A8 158 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 HSP90B2PQ58FF3 399 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 LCE2DQ5TA82 110 aaPredicted RBP9.59□□□□□ -0.87
VPS29-211ENST00000553128 AMIGO2Q86SJ2 522 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 ADAD2Q8NCV1 583 aaKnown RBP9.59□□□□□ -0.87
VPS29-211ENST00000553128 OR52B4Q8NGK2 314 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 TP53TG1Q9Y2A0 90 aa9.59□□□□□ -0.87
VPS29-211ENST00000553128 TRAV8-7A0A075B6U6 113 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 GPX5O75715 221 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 SCAF4O95104 1147 aaKnown RBP9.58□□□□□ -0.88
VPS29-211ENST00000553128 CD2P06729 351 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 MGMTP16455 207 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 IGFBP3P17936 291 aaPredicted RBP9.58□□□□□ -0.88
VPS29-211ENST00000553128 RHOGP84095 191 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 TM4SF20Q53R12 229 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 Q6ZWC4 215 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 ZDHHC13Q8IUH4 622 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 GPR148Q8TDV2 347 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 Q96M66 194 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 SULT4A1Q9BR01 284 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 ERVK13-1Q9NX77 482 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 TECRQ9NZ01 308 aaKnown RBP9.58□□□□□ -0.88
VPS29-211ENST00000553128 MLXQ9UH92 298 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 STEAP1Q9UHE8 339 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 POMPQ9Y244 141 aa9.58□□□□□ -0.88
VPS29-211ENST00000553128 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.57□□□□□ -0.88
VPS29-211ENST00000553128 PDCD6O75340 191 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 OR2C1O95371 312 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 CTRB1P17538 263 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 CBLN1P23435 193 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 GBX2P52951 348 aaPredicted RBP9.57□□□□□ -0.88
VPS29-211ENST00000553128 GYS2P54840 703 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
VPS29-211ENST00000553128 GPR176Q14439 515 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 SLC25A30Q5SVS4 291 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 CTRB2Q6GPI1 263 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 FAM46BQ96A09 425 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 TMEM68Q96MH6 324 aa9.57□□□□□ -0.88
VPS29-211ENST00000553128 C11orf54Q9H0W9 315 aaPredicted RBP9.57□□□□□ -0.88
VPS29-211ENST00000553128 AMBNQ9NP70 447 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms