RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 OR4F5Q8NH21 305 aa11.51□□□□□ -0.57
PRPF40B-209ENST00000548825 OR4F4Q96R69 305 aa11.51□□□□□ -0.57
PRPF40B-209ENST00000548825 RBKSQ9H477 322 aa11.51□□□□□ -0.57
PRPF40B-209ENST00000548825 OPA3Q9H6K4 179 aa11.51□□□□□ -0.57
PRPF40B-209ENST00000548825 GAB2Q9UQC2 676 aa11.51□□□□□ -0.57
PRPF40B-209ENST00000548825 ZZEF1O43149 2961 aa11.51□□□□□ -0.57
PRPF40B-209ENST00000548825 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 SRP19P09132 144 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 TNFSF10P50591 281 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 RTP5Q14D33 572 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 ZNF585BQ52M93 769 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 SSX3Q99909 188 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 SPTBN4Q9H254 2564 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 TMEM30CPA0ZSE6 113 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 MLNRO43193 412 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 ERVFRD-1P60508 538 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 GCSAMLQ5JQS6 135 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 Q6ZR03 302 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 ZCCHC24Q8N2G6 241 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 MDS2Q8NDY4 140 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 Q8WTZ3 238 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 RCC1LQ96I51 464 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 SMIM7Q9BQ49 75 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 PATZ1Q9HBE1 687 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 CECR9P0C854 216 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 S100PP25815 95 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 GNG10P50151 68 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 TFF3Q07654 80 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 TVP23CQ96ET8 276 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 RAB40CQ96S21 281 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 IER2Q9BTL4 223 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 RNF115Q9Y4L5 304 aa11.5□□□□□ -0.57
PRPF40B-209ENST00000548825 M0R1X1 148 aa11.49□□□□□ -0.57
PRPF40B-209ENST00000548825 KIAA1456Q9P272 454 aa11.49□□□□□ -0.57
PRPF40B-209ENST00000548825 ZNF292O60281 2723 aa11.49□□□□□ -0.57
PRPF40B-209ENST00000548825 A0A1B0GU03 582 aa11.49□□□□□ -0.57
PRPF40B-209ENST00000548825 IFNA4P05014 189 aa11.49□□□□□ -0.57
PRPF40B-209ENST00000548825 RPL39P5Q59GN2 51 aa11.49□□□□□ -0.57
PRPF40B-209ENST00000548825 PEAR1Q5VY43 1037 aaPredicted RBP11.49□□□□□ -0.57
PRPF40B-209ENST00000548825 HEYLQ9NQ87 328 aaPredicted RBP11.49□□□□□ -0.57
PRPF40B-209ENST00000548825 MRPS18CQ9Y3D5 142 aaKnown RBP11.49□□□□□ -0.57
PRPF40B-209ENST00000548825 ZNF737O75373 536 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FFAR4Q5NUL3 377 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 PRAMEF5Q5TYX0 476 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 SPRY4Q9C004 299 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 UNKLQ9H9P5 680 aaKnown RBP11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 ODAMA1E959 279 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A10PA6NDY2 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A18PA6NE21 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A16PA6NEW6 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A20PA6NIJ5 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A8PA6NJQ4 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A7PA6NKC0 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A22PA8MWA6 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A12PA8MX19 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A5PA8MXJ8 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A23PA8MXZ1 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 NDUFA2O43678 99 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A15PP0C7V4 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A13PP0C7W8 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A14PP0C7W9 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 FAM90A24PP0C7X0 464 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 S100A2P29034 98 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 MDH2P40926 338 aaKnown RBP11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 ZNF497Q6ZNH5 498 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 HAPLN4Q86UW8 402 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 MOGAT3Q86VF5 341 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 SAXO1Q8IYX7 474 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 COMMD1Q8N668 190 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 CLDND2Q8NHS1 167 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 GMPPAQ96IJ6 420 aaPredicted RBP11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 ARV1Q9H2C2 271 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 COA4Q9NYJ1 87 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 MIOXQ9UGB7 285 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 TRAV38-1A0A0B4J264 116 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 A0A1W2PPQ1 181 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 LINC00587B1AMM8 73 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 PRSS44E7EML9 344 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 COX5BP10606 129 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 C9orf152Q5JTZ5 239 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 OR10P1Q8NGE3 313 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 OR10D4PQ8NGN7 298 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 SNX22Q96L94 193 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 CABLES2Q9BTV7 478 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 SCRT1Q9BWW7 348 aa11.48□□□□□ -0.57
PRPF40B-209ENST00000548825 HBE1P02100 147 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 GPR12P47775 334 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 NKX6-1P78426 367 aaPredicted RBP11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 CATR1Q13166 79 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 ZNF525Q8N782 197 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 DTD1Q8TEA8 209 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 SSMEM1Q8WWF3 244 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 WFIKKN1Q96NZ8 548 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 CLN5O75503 358 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 FTH1P19P0C7X4 201 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 PGA5P0DJD9 388 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 GABRA6Q16445 453 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 ZNF718Q3SXZ3 478 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 SPRNQ5BIV9 151 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 GFOD1Q9NXC2 390 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms