RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-211	ENST00000548247	TMEM50B	P56557	158 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	HLA-DRB3	P79483	266 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RPL39P5	Q59GN2	51 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ZNF429	Q86V71	674 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	NPB	Q8NG41	125 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	FAM3D	Q96BQ1	224 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ARHGAP5-AS1	Q96IT6	56 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	CNBD2	Q96M20	576 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	CHCHD6	Q9BRQ6	235 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PECR	Q9BY49	303 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PARP12	Q9H0J9	701 aa	Known RBP	10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	OR51J1	Q9H342	316 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	C12orf4	Q9NQ89	552 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247	MGAT4A	Q9UM21	535 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247		V9GY05	133 aa		10.2	□□□□□ -0.78
RACGAP1-211	ENST00000548247		I3L521	148 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ITGB1BP1	O14713	200 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	SAP30	O75446	220 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	CT45A6	P0DMU7	189 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	CT45A5	P0DMU8	189 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	CT45A7	P0DMV0	189 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ZBTB25	P24278	435 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PSMB8	P28062	276 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	CEACAM6	P40199	344 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RANBP1	P43487	201 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PSMD7	P51665	324 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	TBCE	Q15813	527 aa	Predicted RBP	10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	C5orf64	Q2M2E5	130 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	C2orf76	Q3KRA6	126 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	HES5	Q5TA89	166 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	LIN54	Q6MZP7	749 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	FAM131A	Q6UXB0	335 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ZNF367	Q7RTV3	350 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	OR1N2	Q8NGR9	330 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	DCUN1D4	Q92564	292 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ABHD14B	Q96IU4	210 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	AGMAT	Q9BSE5	352 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	GNB4	Q9HAV0	340 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247		Q9N2K0	584 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PARP11	Q9NR21	331 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	OR1A1	Q9P1Q5	309 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	KIAA1456	Q9P272	454 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	BLOC1S6	Q9UL45	172 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	WSB1	Q9Y6I7	421 aa		10.19	□□□□□ -0.78
RACGAP1-211	ENST00000548247	IGHV7-81	A0A0B4J1V7	117 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ERICH4	A6NGS2	130 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	OR5H14	A6NHG9	310 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247		G3V318	75 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ATP6V0E1	O15342	81 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	HSPA12A	O43301	675 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	DENR	O43583	198 aa	Known RBP	10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	NDUFA3	O95167	84 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	SCT	P09683	121 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	OR8U8	P0C7N1	319 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PPIF	P30405	207 aa	Known RBP	10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ZNF616	Q08AN1	781 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PLA2G7	Q13093	441 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	KIAA0141	Q14154	515 aa	Predicted RBP	10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	SSX1	Q16384	188 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PLAC9	Q5JTB6	97 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	OR56B1	Q8NGI3	324 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	MYOZ3	Q8TDC0	251 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	EDARADD	Q8WWZ3	215 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	OR5B12	Q96R08	314 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	CMSS1	Q9BQ75	279 aa	Known RBP	10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	GHITM	Q9H3K2	345 aa		10.18	□□□□□ -0.78
RACGAP1-211	ENST00000548247	TRAV1-2	A0A0B4J238	106 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	TRAV41	A0A0B4J266	112 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	TMEM272	A0A1B0GTI8	110 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247		H0YJW9	148 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PDCD5	O14737	125 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	OVOL1	O14753	267 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	IGHV4-30-4	P0DP06	118 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	MC5R	P33032	325 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	GNB1	P62873	340 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	TMEM65	Q6PI78	240 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PTX4	Q96A99	478 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	KLK15	Q9H2R5	256 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	FBXL15	Q9H469	300 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	C19orf73	Q9NVV2	129 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RAB22A	Q9UL26	194 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RNF150	Q9ULK6	438 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RAB26	Q9ULW5	256 aa		10.17	□□□□□ -0.78
RACGAP1-211	ENST00000548247	IGKV1-6	A0A0C4DH72	117 aa		10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	SHISA3	A0PJX4	238 aa		10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RBMY1B	A6NDE4	496 aa	Known RBP	10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RBMY1E	A6NEQ0	496 aa	Known RBP	10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	TRDC	B7Z8K6	153 aa		10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247		H7C2Y5	167 aa		10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RRH	O14718	337 aa		10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	IGLV1-40	P01703	118 aa		10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	GSTP1	P09211	210 aa	Known RBP	10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RBMY1D	P0C7P1	496 aa	Known RBP	10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	OR10A3	P58181	314 aa		10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	RUNX1	Q01196	453 aa		10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	PLGLA	Q15195	96 aa		10.16	□□□□□ -0.78
RACGAP1-211	ENST00000548247	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms