RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 ASPHD1Q5U4P2 390 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 GLDNQ6ZMI3 551 aaPredicted RBP11.17□□□□□ -0.62
COL2A1-209ENST00000546974 PRSS48Q7RTY5 328 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 ARHGAP5-AS1Q96IT6 56 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 PECRQ9BY49 303 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 FBXL15Q9H469 300 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 OR1A1Q9P1Q5 309 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 WASHC3Q9Y3C0 194 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 NUBP2Q9Y5Y2 271 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 H7C2Y5 167 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 SCTP09683 121 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 CRHBPP24387 322 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 CALRP27797 417 aaKnown RBP11.16□□□□□ -0.62
COL2A1-209ENST00000546974 FABP5Q01469 135 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 TMEM267Q0VDI3 215 aaPredicted RBP11.16□□□□□ -0.62
COL2A1-209ENST00000546974 ECSCRQ19T08 205 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 C2orf76Q3KRA6 126 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 CD200R1LQ6Q8B3 271 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 OR56B1Q8NGI3 324 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 FAM3DQ96BQ1 224 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 WWC2-AS2Q96NR7 200 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 PRR25Q96S07 402 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 MGLLQ99685 303 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 CMSS1Q9BQ75 279 aaKnown RBP11.16□□□□□ -0.62
COL2A1-209ENST00000546974 CCDC90BQ9GZT6 254 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 ACOT13Q9NPJ3 140 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.16□□□□□ -0.62
COL2A1-209ENST00000546974 FOXA2Q9Y261 457 aaPredicted RBP11.16□□□□□ -0.62
COL2A1-209ENST00000546974 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 V9GY05 133 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 NBEAL2Q6ZNJ1 2754 aa11.16□□□□□ -0.62
COL2A1-209ENST00000546974 A0A1W2PN81 502 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 FCN1O00602 326 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 LDLRAD4O15165 306 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 SOX15O60248 233 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 PROP1O75360 226 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 EGR2P11161 476 aaPredicted RBP11.15□□□□□ -0.62
COL2A1-209ENST00000546974 CHRNA7P36544 502 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 CLDN12P56749 244 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 PYHIN1Q6K0P9 492 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 OR5B12Q96R08 314 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 TOLLIPQ9H0E2 274 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 ZNF221Q9UK13 617 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 RNF150Q9ULK6 438 aa11.15□□□□□ -0.62
COL2A1-209ENST00000546974 ZNF256Q9Y2P7 627 aaPredicted RBP11.15□□□□□ -0.62
COL2A1-209ENST00000546974 RYR3Q15413 4870 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 IGKV1-6A0A0C4DH72 117 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 TMEM272A0A1B0GTI8 110 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 TRDCB7Z8K6 153 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 DENRO43583 198 aaKnown RBP11.14□□□□□ -0.63
COL2A1-209ENST00000546974 SPDEFO95238 335 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 MAP2K4P45985 399 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 PSG5Q15238 335 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 AKIRIN2Q53H80 203 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 PLAC9Q5JTB6 97 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 ZNF562Q6V9R5 426 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 ZNF429Q86V71 674 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 PPP1R27Q86WC6 154 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 ABHD5Q8WTS1 349 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 DCUN1D4Q92564 292 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 TSNAXQ99598 290 aaKnown RBP11.14□□□□□ -0.63
COL2A1-209ENST00000546974 VCX3BQ9H321 246 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 RAB22AQ9UL26 194 aa11.14□□□□□ -0.63
COL2A1-209ENST00000546974 LINC01619G3V211 115 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 OVOL1O14753 267 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 TFAP2AP05549 437 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 SERPINB10P48595 397 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 RPS16P62249 146 aaKnown RBP11.13□□□□□ -0.63
COL2A1-209ENST00000546974 TBCEQ15813 527 aaPredicted RBP11.13□□□□□ -0.63
COL2A1-209ENST00000546974 ACTBL2Q562R1 376 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 ZNF383Q8NA42 475 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
COL2A1-209ENST00000546974 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.13□□□□□ -0.63
COL2A1-209ENST00000546974 OR4A4PQ8NGN8 299 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 ALX4Q9H161 411 aaPredicted RBP11.13□□□□□ -0.63
COL2A1-209ENST00000546974 TPSG1Q9NRR2 321 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 METTL1Q9UBP6 276 aaKnown RBP11.13□□□□□ -0.63
COL2A1-209ENST00000546974 GAB2Q9UQC2 676 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 A3GALT2U3KPV4 340 aa11.13□□□□□ -0.63
COL2A1-209ENST00000546974 TRAV1-2A0A0B4J238 106 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 PDCD5O14737 125 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 CA2P00918 260 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 APOA2P02652 100 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 IGKV1-16P04430 117 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 LGALS1P09382 135 aaKnown RBP11.12□□□□□ -0.63
COL2A1-209ENST00000546974 CD3GP09693 182 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 CD40LGP29965 261 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 MRPS15P82914 257 aaKnown RBP11.12□□□□□ -0.63
COL2A1-209ENST00000546974 PLA2G7Q13093 441 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 HES5Q5TA89 166 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 UNQ5815/PRO19632Q6UWF5 114 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 ZNF367Q7RTV3 350 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 LFNGQ8NES3 379 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 CASTOR1Q8WTX7 329 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
COL2A1-209ENST00000546974 CLCC1Q96S66 551 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 FAM103A1Q9BTL3 118 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms