RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 TMEM208Q9BTX3 173 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 OR6C3Q9NZP0 311 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 SEMA5BQ9P283 1151 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 KCNS2Q9ULS6 477 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 POLR3KQ9Y2Y1 108 aaPredicted RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 CHD3Q12873 2000 aaKnown RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 ZNF816-ZNF321PA0A0X1KG74 233 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 DUXBA0A1W2PPF3 345 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 C10orf142B7Z368 130 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 H0Y980 276 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 DLEU1O43261 78 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 PAGE4O60829 102 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 TRAPPC6AO75865 159 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 CLDN1O95832 211 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 RPLP1P05386 114 aaKnown RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 SSR4P51571 173 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 SOX8P57073 446 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 SERF2P84101 59 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 LRRC75BQ2VPJ9 315 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 COA6Q5JTJ3 125 aaKnown RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 FAM27BQ5VT28 67 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 TIPARPQ7Z3E1 657 aaKnown RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 ZDHHC23Q8IYP9 409 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 GBGT1Q8N5D6 347 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 RPP25LQ8N5L8 163 aaKnown RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 OR10V1Q8NGI7 309 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 PINX1Q96BK5 328 aaKnown RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 SPACA9Q96E40 222 aaPredicted RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 RASL10BQ96S79 203 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 PYGO2Q9BRQ0 406 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 PATZ1Q9HBE1 687 aaKnown RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 FOXJ2Q9P0K8 574 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 B4GALT7Q9UBV7 327 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 EPG5Q9HCE0 2579 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 CEP295Q9C0D2 2601 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 KIR2DS1A0A191URI9 304 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 GRIFINA4D1Z8 144 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 CLEC18AA5D8T8 446 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 AHRRA9YTQ3 701 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 ETV2O00321 342 aaPredicted RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 SYNGR3O43761 229 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 NXPH2O95156 264 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 HPRT1P00492 218 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 IGKV1D-33P01593 117 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 IGKV1-33P01594 117 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 IGHV3-9P01782 118 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 DEFA4P12838 97 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 CRYGSP22914 178 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 OR10J1P30954 320 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 KIR2DS4P43632 304 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 GPM6AP51674 278 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 UBE2G2P60604 165 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 RBX1P62877 108 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 HIST1H3AP68431 136 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 PSG4Q00888 419 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 SLC38A11Q08AI6 406 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 KIR2DS1Q14954 304 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 ACTL10Q5JWF8 245 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 C1orf194Q5T5A4 169 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 ASCL4Q6XD76 172 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 ZNF295-AS1Q8N0V1 137 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 CLEC18CQ8NCF0 446 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 TAF15Q92804 592 aaKnown RBP eCLIP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 ANAPC16Q96DE5 110 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 WDR61Q9GZS3 305 aaKnown RBP4.52□□□□□ -1.69
KDM3B-209ENST00000542866 PAM16Q9Y3D7 125 aa4.52□□□□□ -1.69
KDM3B-209ENST00000542866 KIAA2026Q5HYC2 2103 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 IGKV1-6A0A0C4DH72 117 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 C1QTNF9BB2RNN3 333 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 NUPR1O60356 82 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 CRYAAP02489 173 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 CELA2AP08217 269 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 IRF2P14316 349 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 CYB561P49447 251 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 Q5PR19 223 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 C9orf135Q5VTT2 229 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 DMRTA1Q5VZB9 504 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 TMPRSS7Q7RTY8 843 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 HAPLN4Q86UW8 402 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 CISD2Q8N5K1 135 aaKnown RBP4.51□□□□□ -1.69
KDM3B-209ENST00000542866 OR10G9Q8NGN4 311 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 OR10G7Q8NGN6 311 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 FGFBP3Q8TAT2 258 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 PSMG3Q9BT73 122 aaPredicted RBP4.51□□□□□ -1.69
KDM3B-209ENST00000542866 MYO15AQ9UKN7 3530 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 LRP4O75096 1905 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 PTPRQQ9UMZ3 2332 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 C9orf172C9J069 976 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 TRAPPC2LH3BP13 241 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 WDR1O75083 606 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 TUSC2O75896 110 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 VAMP5O95183 116 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 CCL2P13500 99 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 GCH1P30793 250 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 HTD2P86397 168 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 ARSJQ5FYB0 599 aaPredicted RBP4.51□□□□□ -1.69
KDM3B-209ENST00000542866 TCF23Q7RTU1 214 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 ZNF488Q96MN9 340 aa4.51□□□□□ -1.69
KDM3B-209ENST00000542866 MSL2Q9HCI7 577 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms