RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 PDZD11Q5EBL8 140 aa12.83□□□□□ -0.36
CLPTM1-202ENST00000541297 GFI1BQ5VTD9 330 aa12.83□□□□□ -0.36
CLPTM1-202ENST00000541297 RHOVQ96L33 236 aa12.83□□□□□ -0.36
CLPTM1-202ENST00000541297 TP53RKQ96S44 253 aa12.83□□□□□ -0.36
CLPTM1-202ENST00000541297 TAAR3PQ9P1P4 343 aa12.83□□□□□ -0.36
CLPTM1-202ENST00000541297 IGSF23A1L1A6 192 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H2BKO60814 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H2BJP06899 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H2BOP23527 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H2BBP33778 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H2BDP58876 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H2BCP62807 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 ADORA2A-AS1P86434 159 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST2H2BEQ16778 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 WDR82Q6UXN9 313 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 ZNF429Q86V71 674 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 DMRTC2Q8IXT2 367 aaPredicted RBP12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H2BHQ93079 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 RBM14Q96PK6 669 aaKnown RBP12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H2BNQ99877 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H2BMQ99879 126 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 KIAA2026Q5HYC2 2103 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 DEGS1O15121 323 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 TFF1P04155 84 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 Q8IYB0 196 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 CYB561D1Q8N8Q1 229 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 PRDM13Q9H4Q3 707 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 UNKLQ9H9P5 680 aaKnown RBP12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 PKDREJQ9NTG1 2253 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 IGSF10Q6WRI0 2623 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 HIVEP3Q5T1R4 2406 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 OR2H2O95918 312 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 CHRNB4P30926 498 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 LINC00596Q86U02 117 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 OR2V2Q96R30 315 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 GPR61Q9BZJ8 451 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 TMED3Q9Y3Q3 217 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 ATP23Q9Y6H3 246 aa12.82□□□□□ -0.36
CLPTM1-202ENST00000541297 IGLV3-9A0A075B6K5 115 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 CYB5BO43169 146 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 SOD3P08294 240 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 ZNF266Q14584 549 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 Q6P435 159 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 POM121Q96HA1 1249 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 ZNF286AQ9HBT8 521 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 A0A087WWC5 75 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 TRGC2P03986 189 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 ICAM4Q14773 271 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 C20orf204Q6ZNR8 217 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 LINC01560Q8TB33 94 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 MAGT1Q9H0U3 335 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 C11orf1Q9H5F2 150 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 KIAA1456Q9P272 454 aa12.81□□□□□ -0.36
CLPTM1-202ENST00000541297 AADACP22760 399 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 SELENOVP59797 346 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 SSTP61278 116 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 CFAP46Q8IYW2 2715 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 A0A1B0GV90 55 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 A0A1B0GWJ7 208 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 SEC14L6B5MCN3 397 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 SCAF4O95104 1147 aaKnown RBP12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 NUP37Q8NFH4 326 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 PRR7Q8TB68 274 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 CA5BP1Q8WTZ4 195 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 MOB3AQ96BX8 217 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 TVP23CQ96ET8 276 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 C14orf144Q96I85 54 aa12.8□□□□□ -0.36
CLPTM1-202ENST00000541297 SLC33A1O00400 549 aaPredicted RBP12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 SSSCA1O60232 199 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 NAPSAO96009 420 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 NKX2-1P43699 371 aaPredicted RBP12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 RUNX1Q01196 453 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 OR5C1Q8NGR4 320 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 LRRC29Q8WV35 223 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 HES4Q9HCC6 221 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 GFOD1Q9NXC2 390 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 WSB1Q9Y6I7 421 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 TRAV39A0A0B4J263 110 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 C3orf85A0A1B0GTC6 90 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 PITX3O75364 302 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 CST7O76096 145 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 PTBP3O95758 552 aaKnown RBP12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 ZNF146Q15072 292 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 KHDC3LQ587J8 217 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 MOGAT3Q86VF5 341 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 HIST3H2BBQ8N257 126 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 TMEM252Q8N6L7 170 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 NIPSNAP3BQ9BS92 247 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 PLEKHF2Q9H8W4 249 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 ANKHD1Q8IWZ3 2542 aaKnown RBP12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 USP24Q9UPU5 2620 aa12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 SPTBN1Q01082 2364 aaKnown RBP12.79□□□□□ -0.36
CLPTM1-202ENST00000541297 BTBD17A6NE02 478 aa12.78□□□□□ -0.36
CLPTM1-202ENST00000541297 CXorf65A6NEN9 183 aa12.78□□□□□ -0.36
CLPTM1-202ENST00000541297 SH2D1BO14796 132 aa12.78□□□□□ -0.36
CLPTM1-202ENST00000541297 PPP1R2P9O14990 202 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms