RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MAP1LC3B2A6NCE7 125 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 DFFBO76075 338 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 HBZP02008 142 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 TFF3Q07654 80 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 RNF212Q495C1 297 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 FAM201AQ5SY85 155 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 MAP1LC3BQ9GZQ8 125 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 KMT2EQ8IZD2 1858 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 HCFC1P51610 2035 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 LRP5LA4QPB2 252 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 C21orf140B9A014 251 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 GCSAMLQ5JQS6 135 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 C9orf152Q5JTZ5 239 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 NINJ1Q92982 152 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 SDSLQ96GA7 329 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 FER1L6-AS2Q96M78 137 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 GP6Q9HCN6 339 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 LIN7CQ9NUP9 197 aaKnown RBP11.47□□□□□ -0.57
BNIP3-202ENST00000540159 KCNIP1Q9NZI2 227 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 COL27A1Q8IZC6 1860 aaPredicted RBP11.47□□□□□ -0.57
BNIP3-202ENST00000540159 SMCO3A2RU48 225 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 MDH2P40926 338 aaKnown RBP11.47□□□□□ -0.57
BNIP3-202ENST00000540159 ZNF506Q5JVG8 444 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
BNIP3-202ENST00000540159 OR13A1Q8NGR1 328 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 GALMQ96C23 342 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 CABLES2Q9BTV7 478 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 GPR61Q9BZJ8 451 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 SLC39A9Q9NUM3 307 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 POLDIP2Q9Y2S7 368 aa11.47□□□□□ -0.57
BNIP3-202ENST00000540159 LOC102723971A0A1B0GUV8 181 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 SPAARA0A1B0GVQ0 90 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 ODAMA1E959 279 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 IGHV2-5P01817 119 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 PGA5P0DJD9 388 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 RAC2P15153 192 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 UTF1Q5T230 341 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A2PQ658T7 463 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 ACSM6Q6P461 480 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 APC2O95996 2303 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 IFITM10A6NMD0 228 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 BCL2P10415 239 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 WT1P19544 449 aaPredicted RBP11.46□□□□□ -0.57
BNIP3-202ENST00000540159 HOXC12P31275 282 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 UBE2G2P60604 165 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 MRPL49Q13405 166 aaKnown RBP11.46□□□□□ -0.57
BNIP3-202ENST00000540159 IER2Q9BTL4 223 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 PKIBQ9C010 78 aa11.46□□□□□ -0.57
BNIP3-202ENST00000540159 LINC00473A8K010 186 aa11.46□□□□□ -0.58
BNIP3-202ENST00000540159 HBG1P69891 147 aa11.46□□□□□ -0.58
BNIP3-202ENST00000540159 HBG2P69892 147 aa11.46□□□□□ -0.58
BNIP3-202ENST00000540159 TNFRSF9Q07011 255 aa11.46□□□□□ -0.58
BNIP3-202ENST00000540159 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.58
BNIP3-202ENST00000540159 COQ2Q96H96 371 aa11.46□□□□□ -0.58
BNIP3-202ENST00000540159 SNX22Q96L94 193 aa11.46□□□□□ -0.58
BNIP3-202ENST00000540159 OPN3Q9H1Y3 402 aaPredicted RBP11.46□□□□□ -0.58
BNIP3-202ENST00000540159 METTL1Q9UBP6 276 aaKnown RBP11.46□□□□□ -0.58
BNIP3-202ENST00000540159 ZNF737O75373 536 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 CRYAAP02489 173 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HSPB1P04792 205 aaKnown RBP11.45□□□□□ -0.58
BNIP3-202ENST00000540159 SELLP14151 372 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 EIF2S3P41091 472 aaKnown RBP11.45□□□□□ -0.58
BNIP3-202ENST00000540159 TGFBR3Q03167 851 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 COL10A1Q03692 680 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 SPRNQ5BIV9 151 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 DBX2Q6ZNG2 339 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 TAF15Q92804 592 aaKnown RBP eCLIP11.45□□□□□ -0.584e-7■■□□□ 12.3
BNIP3-202ENST00000540159 WDR61Q9GZS3 305 aaKnown RBP11.45□□□□□ -0.58
BNIP3-202ENST00000540159 TUBA4BQ9H853 241 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST1H2BKO60814 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST1H2BJP06899 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 FGF7P21781 194 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST1H2BOP23527 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST1H2BBP33778 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST1H2BDP58876 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST1H2BCP62807 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST2H2BEQ16778 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.45□□□□□ -0.58
BNIP3-202ENST00000540159 LRP11Q86VZ4 500 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 C9orf106Q8NAJ2 232 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 OR2Z1Q8NG97 314 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST1H2BHQ93079 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST1H2BNQ99877 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 HIST1H2BMQ99879 126 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 SMIM7Q9BQ49 75 aa11.45□□□□□ -0.58
BNIP3-202ENST00000540159 UNKLQ9H9P5 680 aaKnown RBP11.45□□□□□ -0.58
BNIP3-202ENST00000540159 DUXBA0A1W2PPF3 345 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.44□□□□□ -0.58
BNIP3-202ENST00000540159 HBE1P02100 147 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 HNF1AP20823 631 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 EDDM3BP56851 147 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 BRWD1-AS2P59051 145 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 ERVK11-1P61568 191 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 B2MP61769 119 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 ZGRF1Q86YA3 2104 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 ZNF610Q8N9Z0 462 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 FRZBQ92765 325 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 LRBAP50851 2863 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 M0R296 226 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 LY86O95711 162 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms