RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 FAM230AA0A1W2PPH8 454 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 BOLA2-SMG1P6H3BVE0 249 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 UBE2CO00762 179 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 DHRS3O75911 302 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 IGHV3-7P01780 117 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 HLA-DRB1P01911 266 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 KRT8P05787 483 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 INAFM2P0DMQ5 153 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 RAB3BP20337 219 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 KLF5Q13887 457 aaPredicted RBP6.89□□□□□ -1.31
USP28-205ENST00000537706 BAK1Q16611 211 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 C17orf58Q2M2W7 97 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 PYDC2Q56P42 97 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 IDNKQ5T6J7 187 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 Q6ZWC4 215 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 FAM58AQ8N1B3 248 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 OR10A7Q8NGE5 316 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 OR13C5Q8NGS8 318 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 THEM6Q8WUY1 208 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 LEAP2Q969E1 77 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 CALYQ9NYX4 217 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 MTCH1Q9NZJ7 389 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 LAMP5Q9UJQ1 280 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 DHDHQ9UQ10 334 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 IZUMO1RA6ND01 250 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 NOTOA8MTQ0 251 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 IGLL5B9A064 214 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 MAGEB4O15481 346 aaPredicted RBP6.89□□□□□ -1.31
USP28-205ENST00000537706 TMEM127O75204 238 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 CSN3P07498 182 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 PRKACAP17612 351 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 MAPK3P27361 379 aaPredicted RBP6.89□□□□□ -1.31
USP28-205ENST00000537706 DUSP1P28562 367 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 F2RL1P55085 397 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 SNU13P55769 128 aaKnown RBP6.89□□□□□ -1.31
USP28-205ENST00000537706 OR10A3P58181 314 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 LTC4SQ16873 150 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 HSD17B12Q53GQ0 312 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 DNAAF1Q8NEP3 725 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 OTOSQ8NHW6 89 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 ABHD5Q8WTS1 349 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 ASB17Q8WXJ9 295 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 SPACA5Q96QH8 159 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 OR14A2Q96R54 314 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 PDCD1LG2Q9BQ51 273 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 ZNF251Q9BRH9 671 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 GPR84Q9NQS5 396 aa6.89□□□□□ -1.31
USP28-205ENST00000537706 ELK1P19419 428 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 ALOX5APP20292 161 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 BLVRBP30043 206 aaPredicted RBP6.88□□□□□ -1.31
USP28-205ENST00000537706 TALDO1P37837 337 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 RFX2P48378 723 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 NANOS3P60323 173 aaKnown RBP6.88□□□□□ -1.31
USP28-205ENST00000537706 ALKBH1Q13686 389 aaKnown RBP6.88□□□□□ -1.31
USP28-205ENST00000537706 IL18Q14116 193 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 ZNF146Q15072 292 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 TRIQKQ629K1 86 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 IL34Q6ZMJ4 242 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 SLC25A26Q70HW3 274 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 C11orf45Q8TAV5 145 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 OR51E1Q8TCB6 317 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 CHAC2Q8WUX2 184 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 THRSPQ92748 146 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 DERL3Q96Q80 235 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 WFDC10AQ9H1F0 79 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 ABRACLQ9P1F3 81 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 HERC1Q15751 4861 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 A0A0G2JLM5 398 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 TRBV5-5A0A0J9YX44 114 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 TMEM269A0A1B0GVZ9 245 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 MSGN1A6NI15 193 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 TMEM212A6NML5 194 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 FAM25AB3EWG3 89 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 FAM25CB3EWG5 89 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 FAM25GB3EWG6 89 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 PDCD5O14737 125 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 ZNF254O75437 659 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 OR2A4O95047 310 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 TRGV3P03979 118 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 CSN2P05814 226 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 EIF4EP06730 217 aaKnown RBP6.88□□□□□ -1.31
USP28-205ENST00000537706 ZNF44P15621 663 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 P2RY14Q15391 338 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 TMEM42Q69YG0 159 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 ZNF660Q6AZW8 331 aaPredicted RBP6.88□□□□□ -1.31
USP28-205ENST00000537706 LIN54Q6MZP7 749 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 FDX2Q6P4F2 183 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 NRARPQ7Z6K4 114 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 SAMD12Q8N8I0 201 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 OR5AK2Q8NH90 309 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 MRGPRDQ8TDS7 321 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 RTN4IP1Q8WWV3 396 aaPredicted RBP6.88□□□□□ -1.31
USP28-205ENST00000537706 MS4A10Q96PG2 267 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 PBOV1Q9GZY1 135 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 EXTL2Q9UBQ6 330 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 IKZF2Q9UKS7 526 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 APLNQ9ULZ1 77 aa6.88□□□□□ -1.31
USP28-205ENST00000537706 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
USP28-205ENST00000537706 IGHV7-81A0A0B4J1V7 117 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms