RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CCDC112Q8NEF3 446 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 OR5AK3PQ8NH89 298 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 ACY3Q96HD9 319 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 OR7D2Q96RA2 312 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 RETNLBQ9BQ08 111 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 CYSTM1Q9H1C7 97 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 ASCL3Q9NQ33 180 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 FAM215AQ9Y5M1 114 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 ADAMTSL1Q8N6G6 1762 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 CLUHO75153 1309 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 NOTCH1P46531 2555 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 OR5K4A6NMS3 321 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 K7ERQ8 282 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 YKT6O15498 198 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 PSMG1O95456 288 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 HBZP02008 142 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 OR13C7P0DN81 318 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 IL9P15248 144 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 CFL1P23528 166 aaKnown RBP0.84□□□□□ -2.27
CCDC7-208ENST00000537047 CRATP43155 626 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 PSMD7P51665 324 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 AMTNQ6UX39 209 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 ATP6V1C2Q8NEY4 427 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 OR8B12Q8NGG6 310 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 OR2D3Q8NGH3 330 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 OR52E4Q8NGH9 312 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 FGF13Q92913 245 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 OR52A5Q9H2C5 316 aa0.84□□□□□ -2.27
CCDC7-208ENST00000537047 PLCH2O75038 1416 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 COPEO14579 308 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 ASS1P00966 412 aaKnown RBP0.83□□□□□ -2.28
CCDC7-208ENST00000537047 IGHV1-69P01742 117 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 UCHL1P09936 223 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 ZNF705DP0CH99 300 aaPredicted RBP0.83□□□□□ -2.28
CCDC7-208ENST00000537047 ZNF705BP0CI00 300 aaPredicted RBP0.83□□□□□ -2.28
CCDC7-208ENST00000537047 CCL3P10147 92 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 F8A1P23610 371 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 CD24P25063 80 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 KDELR2P33947 212 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 HSPA9P38646 679 aaKnown RBP0.83□□□□□ -2.28
CCDC7-208ENST00000537047 CA7P43166 264 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 RPL14P50914 215 aaKnown RBP0.83□□□□□ -2.28
CCDC7-208ENST00000537047 LINC00313P59037 77 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 XKRXQ6PP77 449 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 OR5J2Q8NH18 312 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 STOML3Q8TAV4 291 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 RNASEH2CQ8TDP1 164 aaKnown RBP0.83□□□□□ -2.28
CCDC7-208ENST00000537047 LRRC45Q96CN5 670 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 ACBD6Q9BR61 282 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 MIEN1Q9BRT3 115 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 MED10Q9BTT4 135 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 GNB1LQ9BYB4 327 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 OR51B6Q9H340 312 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 C8orf4Q9NR00 106 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 NUP153P49790 1475 aaKnown RBP0.83□□□□□ -2.28
CCDC7-208ENST00000537047 KDM5BQ9UGL1 1544 aa0.83□□□□□ -2.28
CCDC7-208ENST00000537047 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
CCDC7-208ENST00000537047 NPATQ14207 1427 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 TRAV41A0A0B4J266 112 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 OR11H12B2RN74 326 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 F8VZ95 297 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 GOLGA8RI6L899 631 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 UBE2L6O14933 153 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 GSTZ1O43708 216 aaPredicted RBP0.82□□□□□ -2.28
CCDC7-208ENST00000537047 NDUFB2O95178 105 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 CRYBA1P05813 215 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 ZNF728P0DKX0 622 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 ADORA1P30542 326 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 XCL1P47992 114 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 SERPINB10P48595 397 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 HADHBP55084 474 aaKnown RBP0.82□□□□□ -2.28
CCDC7-208ENST00000537047 FAM45BPQ6NSW5 357 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 LHFPL1Q86WI0 220 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 LRRC28Q86X40 367 aaPredicted RBP0.82□□□□□ -2.28
CCDC7-208ENST00000537047 CNEP1R1Q8N9A8 125 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 OR11H2Q8NH07 326 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 TLCD1Q96CP7 247 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 TMEM208Q9BTX3 173 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 METTL9Q9H1A3 318 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 C1orf109Q9NX04 203 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 MS4A12Q9NXJ0 267 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 DSCAML1Q8TD84 2053 aa0.82□□□□□ -2.28
CCDC7-208ENST00000537047 TRAV8-1A0A0A6YYK1 113 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 TRGV5A0A0B4J1U4 118 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 IGKV3D-7A0A0C4DH55 119 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 IGKV3OR2-268A0A0C4DH90 116 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 A0A1W2PQD3 144 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 DAPL1A0PJW8 107 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 RFPL4AA6NLU0 287 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 RFPL4AL1F8VTS6 287 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 MKRN2OSH3BPM6 223 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 CRYBB3P26998 211 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 OR10J1P30954 320 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 DAPP51397 102 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 H2BFSP57053 126 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 SNAP25P60880 206 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 HERVK_113P63121 156 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 BTN3A2P78410 334 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 SLC38A11Q08AI6 406 aa0.81□□□□□ -2.28
CCDC7-208ENST00000537047 SLAMF1Q13291 335 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms