RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CEACAM19Q7Z692 300 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 OR5AN1Q8NGI8 311 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RNF5Q99942 180 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 AGMATQ9BSE5 352 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 PARP12Q9H0J9 701 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 IGHV4OR15-8A0A075B7B6 117 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 A0A087WW49 117 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TRBV6-6A0A0A6YYG2 114 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 BPNT1O95861 308 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 CD37P11049 281 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 EGR2P11161 476 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 ZBTB25P24278 435 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 ACTBL2Q562R1 376 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 CD200R1LQ6Q8B3 271 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 PRSS48Q7RTY5 328 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 PPP1R27Q86WC6 154 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 OR6M1Q8NGM8 313 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 EDARADDQ8WWZ3 215 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TPSG1Q9NRR2 321 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 BLOC1S6Q9UL45 172 aa15.2■□□□□ 0.02
TNFRSF1B-204ENST00000536782 A0A0A6YYD4 124 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 HSPA12AO43301 675 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 SPNP16150 400 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 CD40LGP29965 261 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 CEACAM6P40199 344 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 MED22Q15528 200 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 AKIRIN2Q53H80 203 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 ACSM6Q6P461 480 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 UNQ5815/PRO19632Q6UWF5 114 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 SBSPONQ8IVN8 264 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 OR6Q1Q8NGQ2 317 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 CNBD2Q96M20 576 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 CLCC1Q96S66 551 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 FAM103A1Q9BTL3 118 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 URM1Q9BTM9 101 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 C11orf54Q9H0W9 315 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 LPAR5Q9H1C0 372 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 METTL1Q9UBP6 276 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 AK3Q9UIJ7 227 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 MGAT4AQ9UM21 535 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 GAB2Q9UQC2 676 aa15.19■□□□□ 0.02
TNFRSF1B-204ENST00000536782 SOCS1O15524 211 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 HSPB1P04792 205 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 UCHL1P09936 223 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 OR8U9P0C7N5 309 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 GP9P14770 177 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 HLA-DRB3P79483 266 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 PSG5Q15238 335 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 ZNF562Q6V9R5 426 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 ARPC1AQ92747 370 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 UFD1Q92890 307 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 FLYWCH2Q96CP2 140 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 MS4A10Q96PG2 267 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 HDHD3Q9BSH5 251 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 OR1A1Q9P1Q5 309 aa15.18■□□□□ 0.02
TNFRSF1B-204ENST00000536782 IGHV3-11P01762 117 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 ARSBP15848 533 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 CPEP16870 476 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TPPP2P59282 170 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 PITPNAQ00169 270 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 P2RY14Q15391 338 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 OVCH2Q7RTZ1 564 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 FAM89BQ8N5H3 189 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 DRAXINQ8NBI3 349 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 LFNGQ8NES3 379 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 RCHY1Q96PM5 261 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 OR4C12Q96R67 309 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 SLA2Q9H6Q3 261 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 PLGRKTQ9HBL7 147 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 HSF4Q9ULV5 492 aa15.17■□□□□ 0.02
TNFRSF1B-204ENST00000536782 CA2P00918 260 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TFAP2AP05549 437 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 FRMD6-AS1P0C7T7 363 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 RPS16P62249 146 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 MLLT11Q13015 90 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TPBGQ13641 420 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 MUC7Q8TAX7 377 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 PTX4Q96A99 478 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TSNAXQ99598 290 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 CCDC90BQ9GZT6 254 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 Q9H521 79 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 Q9N2K0 584 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 C12orf4Q9NQ89 552 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 ZNF221Q9UK13 617 aa15.16■□□□□ 0.02
TNFRSF1B-204ENST00000536782 SLC17A2O00624 439 aa15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 ARPC1BO15143 372 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 PROP1O75360 226 aa15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 SPDEFO95238 335 aa15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 SCTP09683 121 aa15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TRAM1Q15629 374 aa15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TBCEQ15813 527 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 LIPKQ5VXJ0 399 aa15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TMEM203Q969S6 136 aa15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 RHOVQ96L33 236 aa15.15■□□□□ 0.02
TNFRSF1B-204ENST00000536782 TRIM64CA6NLI5 447 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 FOXI3A8MTJ6 420 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 APOA2P02652 100 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 TRGV3P03979 118 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 IGKV1-16P04430 117 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 PSMA1P25786 263 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms