RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 FAM229BQ4G0N7 80 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 CST9Q5W186 159 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 TNFAIP8L2Q6P589 184 aaPredicted RBP1.83□□□□□ -2.12
PRKDC-205ENST00000535375 OR8K1Q8NGG5 319 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 MFSD8Q8NHS3 518 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 Q8WTZ3 238 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 RNF133Q8WVZ7 376 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 HDGFL3Q9Y3E1 203 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 KMT2BQ9UMN6 2715 aaPredicted RBP1.83□□□□□ -2.12
PRKDC-205ENST00000535375 PTPRJQ12913 1337 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 CHD2O14647 1828 aaKnown RBP1.82□□□□□ -2.12
PRKDC-205ENST00000535375 DHRS12A0PJE2 317 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 C21orf140B9A014 251 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 G3V3Q6 166 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 H0Y980 276 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 M0QZ92 97 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 PFDN6O15212 129 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 CTSGP08311 255 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 OR4A8P0C604 315 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 PPP1CCP36873 323 aaKnown RBP1.82□□□□□ -2.12
PRKDC-205ENST00000535375 MAGOHP61326 146 aaKnown RBP1.82□□□□□ -2.12
PRKDC-205ENST00000535375 HTR4Q13639 388 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 LRRN1Q6UXK5 716 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 Q6ZS52 159 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 CCDC112Q8NEF3 446 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 MNS1Q8NEH6 495 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 GPR119Q8TDV5 335 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 CPNE2Q96FN4 548 aaPredicted RBP1.82□□□□□ -2.12
PRKDC-205ENST00000535375 SPZ1Q9BXG8 430 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 NKX6-2Q9C056 277 aaPredicted RBP1.82□□□□□ -2.12
PRKDC-205ENST00000535375 MAP1LC3AQ9H492 121 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 HES4Q9HCC6 221 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 MRPL16Q9NX20 251 aaKnown RBP1.82□□□□□ -2.12
PRKDC-205ENST00000535375 ALG5Q9Y673 324 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 HSPE1-MOB4S4R3N1 261 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 FBN3Q75N90 2809 aa1.82□□□□□ -2.12
PRKDC-205ENST00000535375 THSD7AQ9UPZ6 1657 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 TRPM3Q9HCF6 1732 aaPredicted RBP1.81□□□□□ -2.12
PRKDC-205ENST00000535375 C19orf71A6NCJ1 209 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 LRRN3E7EW58 273 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 M0R381 172 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 AHSA1O95433 338 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 MT-CO2P00403 227 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 IL3P08700 152 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 NQO1P15559 274 aaKnown RBP1.81□□□□□ -2.12
PRKDC-205ENST00000535375 NPPCP23582 126 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 DDTP30046 118 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 CA7P43166 264 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 BLVRAP53004 296 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 HLA-DRB3P79483 266 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 PSG4Q00888 419 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 PPP1R1AQ13522 171 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 GNA13Q14344 377 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 COQ5Q5HYK3 327 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 PTRHD1Q6GMV3 140 aaKnown RBP1.81□□□□□ -2.12
PRKDC-205ENST00000535375 MSRB3Q8IXL7 192 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 C1orf174Q8IYL3 243 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 DNAAF3Q8N9W5 541 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 TMEM161BQ8NDZ6 487 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 FNDC9Q8TBE3 224 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 PIGXQ8TBF5 258 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 EEF1AKMT1Q8WVE0 214 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 MS4A6EQ96DS6 147 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 C20orf166-AS1Q96NR2 134 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 PCYT1BQ9Y5K3 369 aaPredicted RBP1.81□□□□□ -2.12
PRKDC-205ENST00000535375 ADCY9O60503 1353 aa1.81□□□□□ -2.12
PRKDC-205ENST00000535375 MUC6Q6W4X9 2439 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 DSCAML1Q8TD84 2053 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 C5orf49A4QMS7 147 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 TP53I11O14683 189 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 ZNF73O43830 326 aaPredicted RBP1.8□□□□□ -2.12
PRKDC-205ENST00000535375 LY6HO94772 140 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 APOEP02649 317 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 CCL3P10147 92 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 ESDP10768 282 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 CRYBB3P26998 211 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 ATP6V0CP27449 155 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 RPL12P30050 165 aaKnown RBP1.8□□□□□ -2.12
PRKDC-205ENST00000535375 ZNF117Q03924 483 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 JOSD1Q15040 202 aaPredicted RBP1.8□□□□□ -2.12
PRKDC-205ENST00000535375 CD200R1LQ6Q8B3 271 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 RASL11AQ6T310 242 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 NAA40Q86UY6 237 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 OR11H1Q8NG94 326 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 GPR32P1Q8NGA4 272 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 OR2D3Q8NGH3 330 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 JOSD2Q8TAC2 188 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 ERMNQ8TAM6 284 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.8□□□□□ -2.12
PRKDC-205ENST00000535375 PTH2Q96A98 100 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 PARD6GQ9BYG4 376 aaPredicted RBP1.8□□□□□ -2.12
PRKDC-205ENST00000535375 FGFR1OP2Q9NVK5 253 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 BABAM2Q9NXR7 383 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 EMC3Q9P0I2 261 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 POLR1DQ9Y2S0 133 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 KLK5Q9Y337 293 aaPredicted RBP1.8□□□□□ -2.12
PRKDC-205ENST00000535375 C9orf84Q5VXU9 1444 aa1.8□□□□□ -2.12
PRKDC-205ENST00000535375 SLC17A3O00476 420 aa1.79□□□□□ -2.12
PRKDC-205ENST00000535375 OVOL1O14753 267 aa1.79□□□□□ -2.12
PRKDC-205ENST00000535375 GSTZ1O43708 216 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms