RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 C11orf54Q9H0W9 315 aaPredicted RBP9.73□□□□□ -0.85
SF3B2-213ENST00000533421 IFI27L2Q9H2X8 130 aa9.73□□□□□ -0.85
SF3B2-213ENST00000533421 RDH8Q9NYR8 311 aa9.73□□□□□ -0.85
SF3B2-213ENST00000533421 TSSC4Q9Y5U2 329 aaPredicted RBP9.73□□□□□ -0.85
SF3B2-213ENST00000533421 SAA2-SAA4A0A096LPE2 208 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 A0A0A6YYH2 397 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 A6NJ64 397 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 NCBP2LA6PVI3 153 aaKnown RBP9.72□□□□□ -0.85
SF3B2-213ENST00000533421 KCNAB3O43448 404 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 LANCL1O43813 399 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 YPEL1O60688 119 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 TMEM127O75204 238 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 MOSP00540 346 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 SAA2P0DJI9 122 aaPredicted RBP9.72□□□□□ -0.85
SF3B2-213ENST00000533421 PF4V1P10720 104 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 NFYAP23511 347 aaPredicted RBP9.72□□□□□ -0.85
SF3B2-213ENST00000533421 EBI3Q14213 229 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 LY6G6FQ5SQ64 297 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 COMMD1Q8N668 190 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 C5orf56Q8N8D9 126 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 MCFD2Q8NI22 146 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 WIPF2Q8TF74 440 aaPredicted RBP9.72□□□□□ -0.85
SF3B2-213ENST00000533421 SNAPC3Q92966 411 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 ST6GALNAC6Q969X2 333 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 YPEL2Q96QA6 119 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 CITED2Q99967 270 aaPredicted RBP9.72□□□□□ -0.85
SF3B2-213ENST00000533421 GINS4Q9BRT9 223 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 CABLES2Q9BTV7 478 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 MRPL20Q9BYC9 149 aaKnown RBP9.72□□□□□ -0.85
SF3B2-213ENST00000533421 GHITMQ9H3K2 345 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 IFT46Q9NQC8 304 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 TRRAPQ9Y4A5 3859 aa9.72□□□□□ -0.85
SF3B2-213ENST00000533421 TRBV6-7A0A0A0MS04 114 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 SMIM31A0A1B0GVY4 71 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 TCRBV4S1A1TA0A5B7 111 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 PSMB11A5LHX3 300 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 OR8U9P0C7N5 309 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 ZBTB25P24278 435 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 PRSS3P35030 304 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 PITPNAQ00169 270 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 KIR2DS1Q14954 304 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 ARL6IP1Q15041 203 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 TMEM95Q3KNT9 176 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 KHDC1LQ5JSQ8 128 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 GLDNQ6ZMI3 551 aaPredicted RBP9.71□□□□□ -0.86
SF3B2-213ENST00000533421 Q6ZS46 218 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 SLC35E3Q7Z769 313 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 HOGA1Q86XE5 327 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 BEST4Q8NFU0 473 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 OR8U1Q8NH10 309 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 OR10J5Q8NHC4 309 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 C5orf30Q96GV9 206 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 RASL11BQ9BPW5 248 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 LIN7CQ9NUP9 197 aaKnown RBP9.71□□□□□ -0.86
SF3B2-213ENST00000533421 PIPOXQ9P0Z9 390 aa9.71□□□□□ -0.86
SF3B2-213ENST00000533421 PMP2P02689 132 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 PF4P02776 101 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 AMY1AP04745 511 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 AMY2AP04746 511 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 SLC6A1P30531 599 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 ARPC4P59998 168 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 CD83Q01151 205 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 HIST2H2BDQ6DRA6 164 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 FAM71F2Q6NXP2 309 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 DRAXINQ8NBI3 349 aaPredicted RBP9.7□□□□□ -0.86
SF3B2-213ENST00000533421 EDARADDQ8WWZ3 215 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 EAF1Q96JC9 268 aaPredicted RBP9.7□□□□□ -0.86
SF3B2-213ENST00000533421 ABHD1Q96SE0 405 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 S1PR3Q99500 378 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 ANXA10Q9UJ72 324 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 WNK1Q9H4A3 2382 aa9.7□□□□□ -0.86
SF3B2-213ENST00000533421 IGKV1D-13A0A0B4J2D9 117 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 AP4M1O00189 453 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 IGHG2P01859 326 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 IGKV1-13P0DP09 117 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 HLA-DMAP28067 261 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 DGCR2P98153 550 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 PDLIM3Q53GG5 364 aaPredicted RBP9.69□□□□□ -0.86
SF3B2-213ENST00000533421 Q6ZS49 121 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 H1FOOQ8IZA3 346 aaPredicted RBP9.69□□□□□ -0.86
SF3B2-213ENST00000533421 OR52I2Q8NH67 350 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 GPX8Q8TED1 209 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 DIRAS2Q96HU8 199 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 CMTM3Q96MX0 182 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 GPHA2Q96T91 129 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 ZNF251Q9BRH9 671 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 NXF2Q9GZY0 626 aaKnown RBP9.69□□□□□ -0.86
SF3B2-213ENST00000533421 OR2D2Q9H210 308 aa9.69□□□□□ -0.86
SF3B2-213ENST00000533421 RBM7Q9Y580 266 aaKnown RBP9.69□□□□□ -0.86
SF3B2-213ENST00000533421 A0A1W2PRX2 142 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 ITGB1BP1O14713 200 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 RAB29O14966 203 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 PROP1O75360 226 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 CD33P20138 364 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 AADACP22760 399 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 TNFSF8P32971 234 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 GPR12P47775 334 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 RFX2P48378 723 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 LSAMPQ13449 338 aa9.68□□□□□ -0.86
SF3B2-213ENST00000533421 IL18Q14116 193 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms