RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 CD200R1LQ6Q8B3 271 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 ZNF429Q86V71 674 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 ABHD5Q8WTS1 349 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 PTX4Q96A99 478 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 RNF5Q99942 180 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 ALX4Q9H161 411 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-207ENST00000531727 DUSP21Q9H596 190 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 Q9N2K0 584 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 C12orf4Q9NQ89 552 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 NKX1-2Q9UD57 310 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-207ENST00000531727 AK6Q9Y3D8 172 aaKnown RBP13.03□□□□□ -0.32
CPSF1-207ENST00000531727 A3GALT2U3KPV4 340 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 ANKRD65E5RJM6 399 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 ARL6IP5O75915 188 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 LY86O95711 162 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 LGALS1P09382 135 aaKnown RBP13.02□□□□□ -0.33
CPSF1-207ENST00000531727 SCTP09683 121 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 PSMA1P25786 263 aaKnown RBP13.02□□□□□ -0.33
CPSF1-207ENST00000531727 VEGFCP49767 419 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 AQP4P55087 323 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 TMEM50BP56557 158 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 TMEM267Q0VDI3 215 aaPredicted RBP13.02□□□□□ -0.33
CPSF1-207ENST00000531727 PYHIN1Q6K0P9 492 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 PPP1R27Q86WC6 154 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 CASTOR1Q8WTX7 329 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 ARHGAP5-AS1Q96IT6 56 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 PECRQ9BY49 303 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 TOLLIPQ9H0E2 274 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 RNF150Q9ULK6 438 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 GAB2Q9UQC2 676 aa13.02□□□□□ -0.33
CPSF1-207ENST00000531727 LINC01619G3V211 115 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 PROP1O75360 226 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 CPEP16870 476 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 SLURP1P55000 103 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 MLLT11Q13015 90 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-207ENST00000531727 PSG5Q15238 335 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 AKIRIN2Q53H80 203 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 ZNF562Q6V9R5 426 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 DRAXINQ8NBI3 349 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-207ENST00000531727 OR56B1Q8NGI3 324 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 DLX4Q92988 240 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-207ENST00000531727 ASCL2Q99929 193 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 CMSS1Q9BQ75 279 aaKnown RBP13.01□□□□□ -0.33
CPSF1-207ENST00000531727 TPSG1Q9NRR2 321 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 METTL1Q9UBP6 276 aaKnown RBP13.01□□□□□ -0.33
CPSF1-207ENST00000531727 ZNF221Q9UK13 617 aa13.01□□□□□ -0.33
CPSF1-207ENST00000531727 NBEAL2Q6ZNJ1 2754 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 IGKV1-6A0A0C4DH72 117 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 RGS10O43665 173 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 SAP30O75446 220 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 SPDEFO95238 335 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 CALRP27797 417 aaKnown RBP13□□□□□ -0.33
CPSF1-207ENST00000531727 CLDN12P56749 244 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 ACTBL2Q562R1 376 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 UNQ5815/PRO19632Q6UWF5 114 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 NRG4Q8WWG1 115 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 FAM3DQ96BQ1 224 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 CLCC1Q96S66 551 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 TSNAXQ99598 290 aaKnown RBP13□□□□□ -0.33
CPSF1-207ENST00000531727 FAM103A1Q9BTL3 118 aaKnown RBP13□□□□□ -0.33
CPSF1-207ENST00000531727 SMAD5-AS1Q9Y6J3 95 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 TENM3Q9P273 2699 aa13□□□□□ -0.33
CPSF1-207ENST00000531727 IGHV4OR15-8A0A075B7B6 117 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 A0A087WW49 117 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 TRDCB7Z8K6 153 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 CA2P00918 260 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 IGKV1-16P04430 117 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 SNRPBP14678 240 aaKnown RBP12.99□□□□□ -0.33
CPSF1-207ENST00000531727 RANBP1P43487 201 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 FABP5Q01469 135 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 C2orf76Q3KRA6 126 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 PLAC9Q5JTB6 97 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 PDPNQ86YL7 162 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 ZNF383Q8NA42 475 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 MGLLQ99685 303 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 CCDC90BQ9GZT6 254 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 RDH8Q9NYR8 311 aa12.99□□□□□ -0.33
CPSF1-207ENST00000531727 LDLRAD4O15165 306 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 DENRO43583 198 aaKnown RBP12.98□□□□□ -0.33
CPSF1-207ENST00000531727 APOA2P02652 100 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 TFAP2AP05549 437 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 CRHBPP24387 322 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 CD40LGP29965 261 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 SERPINB10P48595 397 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 PSMD7P51665 324 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 LINC00205P59089 165 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 TPPP2P59282 170 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 RPS16P62249 146 aaKnown RBP12.98□□□□□ -0.33
CPSF1-207ENST00000531727 ACSM6Q6P461 480 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 PRSS48Q7RTY5 328 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.98□□□□□ -0.33
CPSF1-207ENST00000531727 OR4A4PQ8NGN8 299 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 MS4A10Q96PG2 267 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 SLA2Q9H6Q3 261 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 ACOT13Q9NPJ3 140 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 V9GY05 133 aa12.98□□□□□ -0.33
CPSF1-207ENST00000531727 IGHV3-11P01762 117 aa12.97□□□□□ -0.33
CPSF1-207ENST00000531727 HSPB1P04792 205 aaKnown RBP12.97□□□□□ -0.33
CPSF1-207ENST00000531727 OR8U9P0C7N5 309 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms