RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CXorf21Q9HAI6 301 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 SLCO1B3Q9NPD5 702 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 SIRT7Q9NRC8 400 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 VAPAQ9P0L0 249 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 F11RQ9Y624 299 aaKnown RBP3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 KIF25-AS1Q9Y6Z4 181 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CEACAM18A8MTB9 384 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 M0R2N4 97 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 RTL8CO15255 209 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 GMDSO60547 372 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SUPT3HO75486 399 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SEMA3DO95025 777 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 GAS8-AS1O95177 125 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 MOSP00540 346 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 UCHL3P15374 230 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CTRLP40313 264 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CRATP43155 626 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 PPICP45877 212 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 TTPAP49638 278 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SYNJ2BPP57105 145 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 KLF3P57682 345 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 DSTNP60981 165 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 RPL18AQ02543 176 aaKnown RBP3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 GPR176Q14439 515 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 POU2AF1Q16633 256 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 KRT71Q3SY84 523 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 TMEM155Q4W5P6 130 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 ERICH5Q6P6B1 374 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 ARL9Q6T311 187 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 LYPD2Q6UXB3 125 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CYHR1Q6ZMK1 362 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SGPP2Q8IWX5 399 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 TTLQ8NG68 377 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR8B3Q8NGG8 313 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 LGALS14Q8TCE9 139 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 RGP1Q92546 391 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 HAUS1Q96CS2 278 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SCGB3A2Q96PL1 93 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR8B2Q96RD0 313 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 NAA50Q9GZZ1 169 aaKnown RBP3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 REEP1Q9H902 201 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 TREX1Q9NSU2 369 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CD300AQ9UGN4 299 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CES1P1Q9UKY3 287 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 HYOU1Q9Y4L1 999 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 AGRNO00468 2067 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 GPR171O14626 319 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 SLC16A7O60669 478 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 ENTPD5O75356 428 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TTC4O95801 387 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 GCGP01275 180 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 CD3GP09693 182 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 SLC35E2BP0CK96 405 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 GLRXP35754 106 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 MYCNOSP40205 109 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 SERPINB8P50452 374 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 VSNL1P62760 191 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 DAZ2Q13117 558 aaKnown RBP3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 ERCC8Q13216 396 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 PNOCQ13519 176 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 IL34Q6ZMJ4 242 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRRC6Q86X45 466 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 STPG2Q8N412 459 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR11H7Q8NGC8 314 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR52R1Q8NGF1 315 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRRC29Q8WV35 223 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TMEM239Q8WW34 195 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 BAALCQ8WXS3 180 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 CDKL2Q92772 493 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 SGTBQ96EQ0 304 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 OLFM3Q96PB7 478 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 RNF157Q96PX1 679 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TSPAN32Q96QS1 320 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 VAT1Q99536 393 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 HINT2Q9BX68 163 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 CDCA4Q9BXL8 241 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR51B6Q9H340 312 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TREM1Q9NP99 234 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 DAZ3Q9NR90 486 aaKnown RBP3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 MS4A12Q9NXJ0 267 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TP53TG3Q9ULZ0 132 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 RBMX2Q9Y388 322 aaKnown RBP3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRP2P98164 4655 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 FAT1Q14517 4588 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 IGLV1-36A0A0B4J1U3 117 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 IGHV3-66A0A0C4DH42 116 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ANKRD20A5PA0PJZ0 165 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 PLAC8L1A1L4L8 177 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ERI2A8K979 691 aaKnown RBP3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 H3BSH0 61 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 GABRPO00591 440 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 GABARAPO95166 117 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 EIF4EP06730 217 aaKnown RBP3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 PGA5P0DJD9 388 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 RBM34P42696 430 aaKnown RBP3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 CXCL5P42830 114 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 CSNK1A1P48729 337 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms