RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 ZNF107Q9UII5 783 aaPredicted RBP11.15□□□□□ -0.62
CCHCR1-222ENST00000507459 RBM7Q9Y580 266 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-222ENST00000507459 TRAV18A0A075B6X5 111 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 OR5H14A6NHG9 310 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 H0YJW9 148 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 M0R1X1 148 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 RRP9O43818 475 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 PROP1O75360 226 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 PF4P02776 101 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 MC5RP33032 325 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 OR2D2Q9H210 308 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 WASHC3Q9Y3C0 194 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 ETV7Q9Y603 341 aa11.14□□□□□ -0.63
CCHCR1-222ENST00000507459 G3V4G9 280 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 J3QRK9 145 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 PLXNB1O43157 2135 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 WIPF1O43516 503 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 TFAP2AP05549 437 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 DTYMKP23919 212 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 RPS19P39019 145 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 SCAND1P57086 179 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 PITPNAQ00169 270 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 PLGLAQ15195 96 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 SRSF7Q16629 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 PNLIPRP3Q17RR3 467 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 C5orf64Q2M2E5 130 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 LIN54Q6MZP7 749 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 TEX38Q6PEX7 206 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 ZNF383Q8NA42 475 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 OR5AN1Q8NGI8 311 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 SLC25A38Q96DW6 304 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 GON7Q9BXV9 100 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 TOLLIPQ9H0E2 274 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 FBXL15Q9H469 300 aa11.13□□□□□ -0.63
CCHCR1-222ENST00000507459 NUDT19A8MXV4 375 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 SSX5O60225 188 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 CD33P20138 364 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 VDAC1P21796 283 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 RPL23AP62750 156 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 Q6ZS49 121 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 C18orf65Q6ZTR6 163 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 COMMD1Q8N668 190 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 NPBQ8NG41 125 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 DCSTAMPQ9H295 470 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 PARP11Q9NR21 331 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 DIABLOQ9NR28 239 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 SDHAF2Q9NX18 166 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 WSB1Q9Y6I7 421 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 NOTCH1P46531 2555 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 NOTCH3Q9UM47 2321 aa11.12□□□□□ -0.63
CCHCR1-222ENST00000507459 MEGF8Q7Z7M0 2845 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 TRIM64CA6NLI5 447 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 RRHO14718 337 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 NDUFA3O95167 84 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 DIRAS3O95661 229 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 HLA-DRB1P01911 266 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 APOA2P02652 100 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 RPLP1P05386 114 aaKnown RBP11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 RPS16P62249 146 aaKnown RBP11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 OXLD1Q5BKU9 147 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 CXorf66Q5JRM2 361 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 CROCCP3Q8IVE0 287 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 H1FOOQ8IZA3 346 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 CLCC1Q96S66 551 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 OR51J1Q9H342 316 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 ZFP57Q9NU63 452 aa11.11□□□□□ -0.63
CCHCR1-222ENST00000507459 IGHV7-81A0A0B4J1V7 117 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 G3V318 75 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 FCN1O00602 326 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 ATP6V0E1O15342 81 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 RBBP9O75884 186 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 IGF1P05019 195 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 FCER2P06734 321 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 CTXN2P0C2S0 81 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 PTHLHP12272 177 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 NFYAP23511 347 aaPredicted RBP11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 VBP1P61758 197 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 NCS1P62166 190 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 C8orf86Q6ZUL3 223 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 FLYWCH2Q96CP2 140 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 C5orf30Q96GV9 206 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 SLC35D1Q9NTN3 355 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 METTL1Q9UBP6 276 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 GAB2Q9UQC2 676 aa11.1□□□□□ -0.63
CCHCR1-222ENST00000507459 A0A0A6YYH2 397 aa11.09□□□□□ -0.63
CCHCR1-222ENST00000507459 A6NJ64 397 aa11.09□□□□□ -0.63
CCHCR1-222ENST00000507459 TMEM127O75204 238 aa11.09□□□□□ -0.63
CCHCR1-222ENST00000507459 SMIM18P0DKX4 95 aa11.09□□□□□ -0.63
CCHCR1-222ENST00000507459 OR5H8P0DN80 308 aa11.09□□□□□ -0.63
CCHCR1-222ENST00000507459 CFHR3Q02985 330 aa11.09□□□□□ -0.63
CCHCR1-222ENST00000507459 FOXE3Q13461 319 aa11.09□□□□□ -0.63
CCHCR1-222ENST00000507459 PSG5Q15238 335 aa11.09□□□□□ -0.63
CCHCR1-222ENST00000507459 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms