RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 CADP27708 2225 aa3.97□□□□□ -1.77
NIPBL-205ENST00000505998 DOPEY2Q9Y3R5 2298 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 A0A1B0GUH1 482 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 SLC22A20A6NK97 555 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 EFCAB9A8MZ26 197 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 TSTD3H0UI37 97 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 DNASE2O00115 360 aaPredicted RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 ARPC5O15511 151 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 OR10H3O60404 316 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 SCGNO76038 276 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 NDUFB2O95178 105 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 RLN2P04090 185 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 HSPB1P04792 205 aaKnown RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 CD14P08571 375 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 STAG3L2P0CL84 134 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 PGA4P0DJD7 388 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 PGA3P0DJD8 388 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 MUC1P15941 1255 aaPredicted RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 PSMB1P20618 241 aaKnown RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 CD80P33681 288 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 KIR2DS2P43631 304 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 OR3A4PP47883 348 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 ATP5IP56385 69 aaPredicted RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 RAB25P57735 213 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 TNFRSF9Q07011 255 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 TFF3Q07654 80 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 AQP6Q13520 282 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 MPPED2Q15777 294 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 C12orf73Q69YU5 71 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 SMARCD3Q6STE5 483 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 MRPL52Q86TS9 123 aaKnown RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 WDFY1Q8IWB7 410 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 SKA3Q8IX90 412 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 SELENOHQ8IZQ5 122 aaKnown RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 HS3ST5Q8IZT8 346 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 GABRG1Q8N1C3 465 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 C9orf62Q8N4C0 152 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 RPRMLQ8N4K4 120 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 ARRDC1Q8N5I2 433 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 ARIH2OSQ8N7S6 290 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 CCDC54Q8NEL0 328 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 BPIFCQ8NFQ6 507 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 OR2T33Q8NG76 320 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 LINC01006Q8NI28 216 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 GNPDA2Q8TDQ7 276 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 ABHD3Q8WU67 409 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 TCTEX1D2Q8WW35 142 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 RPL3LQ92901 407 aaKnown RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 EMG1Q92979 244 aaKnown RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 TMEM54Q969K7 222 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 TMEM203Q969S6 136 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 PRRT1Q99946 306 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 TAPBPLQ9BX59 468 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 TMEM185BQ9H7F4 350 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF702PQ9H963 129 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 CMC2Q9NRP2 79 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 PDP1Q9P0J1 537 aaPredicted RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 PIPOXQ9P0Z9 390 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 PEF1Q9UBV8 284 aaKnown RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 SCP2D1Q9UJQ7 156 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 MCTS1Q9ULC4 181 aaKnown RBP3.96□□□□□ -1.78
NIPBL-205ENST00000505998 PPIAL4AQ9Y536 164 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 PEX16Q9Y5Y5 336 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 RTTNQ86VV8 2226 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 COL12A1Q99715 3063 aa3.96□□□□□ -1.78
NIPBL-205ENST00000505998 CHD3Q12873 2000 aaKnown RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 HRNRQ86YZ3 2850 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 ABCA4P78363 2273 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 PKDREJQ9NTG1 2253 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 IGLV1-36A0A0B4J1U3 117 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 TRDCB7Z8K6 153 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 PRB1P04280 392 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF44P15621 663 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 ABOP16442 354 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 SLC2A5P22732 501 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 AQP2P41181 271 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 DAP3P51398 398 aaKnown RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 IDH3GP51553 393 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 CRISP1P54107 249 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 RAB2AP61019 212 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 RAB5BP61020 215 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 RAP1BP61224 184 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 PKIAP61925 76 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 ADARB1P78563 741 aaKnown RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 IFITM3Q01628 133 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 OR7A5Q15622 319 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 TRAM1Q15629 374 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 DGUOKQ16854 277 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 PGGHGQ32M88 737 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 SLC25A35Q3KQZ1 300 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 Q5BKY6 102 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 MESTQ5EB52 335 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 BEX5Q5H9J7 111 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 LINC01590Q5TEZ4 76 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 LPCAT4Q643R3 524 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 Q6ZT83 130 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 SSX8Q7RTT4 187 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 OAFQ86UD1 273 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 C20orf196Q8IYI0 205 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 C8orf59Q8N0T1 100 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms