RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 VSIRQ9H7M9 311 aa3.22□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ZNF430Q9H8G1 570 aaPredicted RBP3.22□□□□□ -1.89
PDLIM1P4-201ENST00000504327 MIEF1Q9NQG6 463 aa3.22□□□□□ -1.89
PDLIM1P4-201ENST00000504327 CMTM6Q9NX76 183 aa3.22□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ARMCX1Q9P291 453 aa3.22□□□□□ -1.89
PDLIM1P4-201ENST00000504327 CACNG5Q9UF02 275 aa3.22□□□□□ -1.89
PDLIM1P4-201ENST00000504327 SLC23A2Q9UGH3 650 aa3.22□□□□□ -1.89
PDLIM1P4-201ENST00000504327 SPTBP11277 2137 aa3.22□□□□□ -1.89
PDLIM1P4-201ENST00000504327 LAMA5O15230 3695 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TEX15Q9BXT5 2789 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PHF3Q92576 2039 aaKnown RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 IGLV3-16A0A075B6K0 115 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TRAV8-6A0A0B4J262 113 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 IGHV3-16A0A0C4DH30 117 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR51F1A6NGY5 319 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 H0Y9J4 135 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 KALRNO60229 2985 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 FOXH1O75593 365 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SLC25A14O95258 325 aaPredicted RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 IGKV1D-16P01601 117 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SHBGP04278 402 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 NBEAP1P0C6P0 100 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 LINC00614P0C842 121 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ICAM2P13598 275 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CTSEP14091 401 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 IDO1P14902 403 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TCN2P20062 427 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TAC1P20366 129 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 FGF8P55075 233 aaPredicted RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TAS2R43P59537 309 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TAS2R19P59542 299 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CACNG7P62955 275 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PRR3P79522 188 aaKnown RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TSNQ15631 228 aaKnown RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ZNF630Q2M218 657 aaPredicted RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ARHGAP11BQ3KRB8 267 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR2B11Q5JQS5 317 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ZNF506Q5JVG8 444 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OLIG3Q7RTU3 272 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TMEM144Q7Z5S9 345 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 GKN2Q86XP6 184 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ARIH2OSQ8N7S6 290 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 AQP11Q8NBQ7 271 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR11H7Q8NGC8 314 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR10AD1Q8NGE0 317 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR6T1Q8NGN1 323 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR10J5Q8NHC4 309 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 STAG3L4Q8TBR4 150 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PATE1Q8WXA2 126 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 MAFIPQ8WZ33 124 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 MARC2Q969Z3 335 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 FOPNLQ96NB1 174 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR5M11Q96RB7 305 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SIGMAR1Q99720 223 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CMSS1Q9BQ75 279 aaKnown RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 MRPL57Q9BQC6 102 aaKnown RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ZNF2Q9BSG1 426 aaPredicted RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 GABARAPL3Q9BY60 117 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 JPT2Q9H910 190 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TMEM100Q9NV29 134 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CLCF1Q9UBD9 225 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 KLK13Q9UKR3 277 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 C14orf166Q9Y224 244 aaKnown RBP3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 NDUFAF1Q9Y375 327 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PYGO1Q9Y3Y4 419 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PRSS21Q9Y6M0 314 aa3.21□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SNRNP200O75643 2136 aaKnown RBP3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PRRC2CQ9Y520 2896 aaKnown RBP3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 MYO9AB2RTY4 2548 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ANKRD12Q6UB98 2062 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TRAV8-2A0A0B4J237 113 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 A0A1W2PNU3 283 aaPredicted RBP3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 EFCAB10A6NFE3 127 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 RBFOX3A6NFN3 312 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 RPL37AP8A6NKH3 93 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TRIM49D1C9J1S8 452 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ZNF878C9JN71 531 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TSTD3H0UI37 97 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 C15orf65H3BRN8 121 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SLC31A2O15432 143 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR1I1O60431 355 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SMIM24O75264 130 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 BANF1O75531 89 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 LYPLA1O75608 230 aaPredicted RBP3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 POP7O75817 140 aaKnown RBP3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 VENTXO95231 258 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 C1QAP02745 245 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 C8GP07360 202 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 IL3P08700 152 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CXCR1P25024 350 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 BTCP35070 178 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 P2RX1P51575 399 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 DNAJB13P59910 316 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SLC35A2P78381 396 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CD300CQ08708 224 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CD47Q08722 323 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 KIAA0087Q14695 138 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TGIF1Q15583 401 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CCDC58Q4VC31 144 aa3.2□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ACSBG2Q5FVE4 666 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms