RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 HIVEP1P15822 2718 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 C15orf65H3BRN8 121 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 ADAM20O43506 726 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 BCL2L11O43521 198 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 MMP9P14780 707 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 NKX2-1P43699 371 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-214ENST00000495485 GPR12P47775 334 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 DSCR9P59020 149 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 KRTAP10-9P60411 292 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 VAMP2P63027 116 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 IL15RAQ13261 267 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 RAB32Q13637 225 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 MST1LQ2TV78 715 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 Q3ZCU0 254 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 MORN2Q502X0 79 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 SPRNQ5BIV9 151 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 GPR157Q5UAW9 335 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 C11orf71Q6IPW1 123 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 EIF5AL1Q6IS14 154 aaKnown RBP8.51□□□□□ -1.05
HDAC3-214ENST00000495485 LYZL2Q7Z4W2 148 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 SELENOHQ8IZQ5 122 aaKnown RBP8.51□□□□□ -1.05
HDAC3-214ENST00000495485 FAM71E2Q8N5Q1 922 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 DRAM1Q8N682 238 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 TPRX1Q8N7U7 411 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 OR51H1Q8NH63 302 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 RAB1CQ92928 201 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 IDI2-AS1Q9NZ38 188 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 PRELID3BQ9Y3B1 194 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 KIAA2026Q5HYC2 2103 aa8.51□□□□□ -1.05
HDAC3-214ENST00000495485 MED13LQ71F56 2210 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 K7EPK0 472 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 TNFSF12O43508 249 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 DEDDO75618 318 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 SCGB1D2O95969 90 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 DAOP14920 347 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 SSTR5P35346 364 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 PPP1CCP36873 323 aaKnown RBP8.5□□□□□ -1.05
HDAC3-214ENST00000495485 ARHGDIBP52566 201 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 AKR1C2P52895 323 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 RPL31P62899 125 aaKnown RBP8.5□□□□□ -1.05
HDAC3-214ENST00000495485 ZNF680Q8NEM1 530 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 OR1S1Q8NH92 325 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 RFESDQ8TAC1 157 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 LRRC20Q8TCA0 184 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 NEUROG1Q92886 237 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 PHYHIPLQ96FC7 376 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 ADTRPQ96IZ2 230 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 AQP10Q96PS8 301 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 SLC25A31Q9H0C2 315 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 PRR13Q9NZ81 148 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 PSG11Q9UQ72 335 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 LSM5Q9Y4Y9 91 aaKnown RBP8.5□□□□□ -1.05
HDAC3-214ENST00000495485 POMT1Q9Y6A1 747 aa8.5□□□□□ -1.05
HDAC3-214ENST00000495485 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.49□□□□□ -1.053e-7■■■■□ 23.6
HDAC3-214ENST00000495485 ZANQ9Y493 2812 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 TRBV23-1A0A0A0MS06 115 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 hCG_1809904A0A1W2PP81 198 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 A0A1W2PPE2 198 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 A0A1W2PR64 198 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 A0A1W2PRV1 198 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 F5H0A9 414 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-214ENST00000495485 RAB29O14966 203 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 GPR137BO60478 399 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 MED6O75586 246 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 LY86O95711 162 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 SOD3P08294 240 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 CGB3P0DN86 165 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 CGB7P0DN87 165 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 TPT1P13693 172 aaKnown RBP8.49□□□□□ -1.05
HDAC3-214ENST00000495485 S100A1P23297 94 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 P2RY1P47900 373 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 FAM201AQ5SY85 155 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 SPNS3Q6ZMD2 512 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 FOXRED2Q8IWF2 684 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 OR8H3Q8N146 312 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 ZCCHC24Q8N2G6 241 aaKnown RBP8.49□□□□□ -1.05
HDAC3-214ENST00000495485 SCARB1Q8WTV0 552 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 TCTEX1D2Q8WW35 142 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 ZNF714Q96N38 554 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 S1PR3Q99500 378 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 AIFM2Q9BRQ8 373 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 RNF126Q9BV68 326 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 ZNF471Q9BX82 626 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-214ENST00000495485 LINC00574Q9H8X3 128 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 GFOD1Q9NXC2 390 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 MIOXQ9UGB7 285 aa8.49□□□□□ -1.05
HDAC3-214ENST00000495485 CSPG4Q6UVK1 2322 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 BORCS7-ASMTA0A0B4J1R7 106 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 IGHV3-43A0A0B4J1X8 118 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 MPTX1A8MV57 137 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 FAM90A26D6RGX4 464 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 NDUFS8O00217 210 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 SCAF4O95104 1147 aaKnown RBP8.48□□□□□ -1.05
HDAC3-214ENST00000495485 TFF1P04155 84 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 IGHV3-43DP0DP04 118 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 RPL12P30050 165 aaKnown RBP8.48□□□□□ -1.05
HDAC3-214ENST00000495485 HTR2BP41595 481 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 LPAR6P43657 344 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 EFNA4P52798 201 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 RPL23AP62750 156 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms