RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ERGIC3Q9Y282 383 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 FIS1Q9Y3D6 152 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 HDGFL3Q9Y3E1 203 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ZBED9Q6R2W3 1325 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ANKRD30AQ9BXX3 1397 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ADGRL3Q9HAR2 1447 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 IGKV3D-11A0A0A0MRZ8 115 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 A0A1B0GVG6 124 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 ZNF729A6NN14 1252 aaPredicted RBP1.31□□□□□ -2.2
LMNB1-207ENST00000494185 COLCA2A8K830 154 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 A8MWP4 228 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 TMEM238C9JI98 176 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 DEDDO75618 318 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 LYPLA2O95372 231 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 MT-CO2P00403 227 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 IGHV3-53P01767 116 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 IGHG2P01859 326 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 GYPCP04921 128 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 GUSBP08236 651 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 ZNF708P17019 499 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 HSD11B1P28845 292 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 CD34P28906 385 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 CCR7P32248 378 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 TGFBR2P37173 567 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 AKR1C2P52895 323 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 TMEM33P57088 247 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 LINC00313P59037 77 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 FGF12P61328 243 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 ARF6P62330 175 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 RANP62826 216 aaKnown RBP1.31□□□□□ -2.2
LMNB1-207ENST00000494185 HERVK_113P63121 156 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 FLI1Q01543 452 aaPredicted RBP1.31□□□□□ -2.2
LMNB1-207ENST00000494185 GLO1Q04760 184 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 TSPAN31Q12999 210 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 SRSF6Q13247 344 aaKnown RBP1.31□□□□□ -2.2
LMNB1-207ENST00000494185 HIST2H3PS2Q5TEC6 136 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 OR10K2Q6IF99 312 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 KRTAP5-5Q701N2 237 aaPredicted RBP1.31□□□□□ -2.2
LMNB1-207ENST00000494185 ZNF550Q7Z398 422 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 LYZL2Q7Z4W2 148 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 ATP5L2Q7Z4Y8 100 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 TAC4Q86UU9 113 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 LY6G5BQ8NDX9 201 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 BPIFB6Q8NFQ5 453 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 OR5B17Q8NGF7 314 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 LZICQ8WZA0 190 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 MS4A6EQ96DS6 147 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 CPNE2Q96FN4 548 aaPredicted RBP1.31□□□□□ -2.2
LMNB1-207ENST00000494185 CEP19Q96LK0 163 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 SEC22CQ9BRL7 303 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 MED18Q9BUE0 208 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 PLA2G12AQ9BZM1 189 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 GABARAPL1Q9H0R8 117 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 OR51I1Q9H343 314 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.31□□□□□ -2.2
LMNB1-207ENST00000494185 GINS2Q9Y248 185 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 PHLDA3Q9Y5J5 127 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 PCYT1BQ9Y5K3 369 aaPredicted RBP1.31□□□□□ -2.2
LMNB1-207ENST00000494185 SCN1AP35498 2009 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 ROCK1Q13464 1354 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 SVILO95425 2214 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 CABIN1Q9Y6J0 2220 aa1.31□□□□□ -2.2
LMNB1-207ENST00000494185 MIA3Q5JRA6 1907 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 PCM1Q15154 2024 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 DNMT1P26358 1616 aaKnown RBP1.3□□□□□ -2.2
LMNB1-207ENST00000494185 TRBV24-1A0A075B6N3 115 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 IGKV1OR2-108A0A075B7D4 117 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 UQCRHLA0A096LP55 91 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 IGKV1-12A0A0C4DH73 117 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 A0A1B0GV50 99 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 EVPLLA8MZ36 301 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 C4orf51C9J302 202 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 H3BMM0 161 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 RPL36A-HNRNPH2H7BZ11 118 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 SH2D1AO60880 128 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 IGKV1D-33P01593 117 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 IGKV1-33P01594 117 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 IGKV1D-12P01611 117 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 UQCRHP07919 91 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 CD7P09564 240 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 INAFM2P0DMQ5 153 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 IGHV3-30-3P0DP02 117 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 ORM2P19652 201 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 PRPS1L1P21108 318 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 S100A2P29034 98 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 CA7P43166 264 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 MARCKSL1P49006 195 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 CTBP2P56545 445 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 OR4D2P58180 307 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 KRTAP10-10P60014 251 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 SPCS3P61009 180 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 HOXC5Q00444 222 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 JOSD1Q15040 202 aaPredicted RBP1.3□□□□□ -2.2
LMNB1-207ENST00000494185 PDGFRLQ15198 375 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 RSU1Q15404 277 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 OR8G1Q15617 311 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 PLPPR5Q32ZL2 321 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 PYCR3Q53H96 274 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 SPIN3Q5JUX0 258 aa1.3□□□□□ -2.2
LMNB1-207ENST00000494185 LDLRAD2Q5SZI1 272 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms