RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 MSMO1Q15800 293 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 SLC35E4Q6ICL7 350 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 ACSM6Q6P461 480 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 FIP1L1Q6UN15 594 aaKnown RBP13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 FAM180AQ6UWF9 173 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 CXorf67Q86X51 503 aaPredicted RBP13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 C1orf87Q8N0U7 546 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 GCNT2Q8N0V5 402 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 ZNF808Q8N4W9 903 aaPredicted RBP13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 ODAMA1E959 279 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 S1PR2O95136 353 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 IFNA1P01562 189 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 IL2RGP31785 369 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 CD81P60033 236 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 Q6ZR03 302 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 TMPRSS7Q7RTY8 843 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 LHX4Q969G2 390 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 COQ2Q96H96 371 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 OBP2BQ9NPH6 170 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 SLC39A9Q9NUM3 307 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 CLN8Q9UBY8 286 aa13.52□□□□□ -0.25
SEMA4D-220ENST00000492386 OOEPA6NGQ2 149 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 PMS2P5A8MQ11 134 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 C17orf98A8MV24 154 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 SP9P0CG40 484 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 PYY3Q5JQD4 70 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 PLA2G2CQ5R387 149 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 INO80CQ6PI98 192 aaPredicted RBP13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 ABHD5Q8WTS1 349 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 CLCF1Q9UBD9 225 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 URB1O60287 2271 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 TFF1P04155 84 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 HNF4GQ14541 408 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 HES3Q5TGS1 186 aa13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.51□□□□□ -0.25
SEMA4D-220ENST00000492386 DOCK11Q5JSL3 2073 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 SEC14L6B5MCN3 397 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 PHOX2AO14813 284 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 GFI1BQ5VTD9 330 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 TMEM178AQ8NBL3 297 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 FRZBQ92765 325 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 AGMATQ9BSE5 352 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 TMEM147Q9BVK8 224 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 CACNA1DQ01668 2161 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 TRBV24-1A0A075B6N3 115 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 TRAV20A0A0B4J274 112 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 SOD3P08294 240 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 TRGC1P0CF51 173 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 S100A2P29034 98 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 MEF2BQ02080 365 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 CATR1Q13166 79 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 ATP6V1FQ16864 119 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 BTNL3Q6UXE8 466 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 ACP7Q6ZNF0 438 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 Q6ZT83 130 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 MRGPRDQ8TDS7 321 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 CTDSP1Q9GZU7 261 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 PTPRBP23467 1997 aa13.5□□□□□ -0.25
SEMA4D-220ENST00000492386 ZG16O60844 167 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 FAM214BQ7L5A3 538 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 HIST3H2BBQ8N257 126 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 PRR7Q8TB68 274 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 MRPL37Q9BZE1 423 aaKnown RBP13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 HMGB3O15347 200 aaKnown RBP13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 AGFG2O95081 481 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 CLDN14O95500 239 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 OPN1MWP04001 364 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 OPN1MW2P0DN77 364 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 OPN1MW3P0DN78 364 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 TNFSF10P50591 281 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 NKX6-1P78426 367 aaPredicted RBP13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 GUSBP1Q15486 140 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 WDR82Q6UXN9 313 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 CYP2G1PQ6ZSU1 146 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 DTD1Q8TEA8 209 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 ZDHHC16Q969W1 377 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 SMIM7Q9BQ49 75 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 SLC25A22Q9H936 323 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 NAT8Q9UHE5 227 aa13.49□□□□□ -0.25
SEMA4D-220ENST00000492386 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 CTXND1A0A1B0GTU2 59 aa13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 IGKV3-15P01624 115 aa13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 GABRA2P47869 451 aa13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 PRAMEF6Q5VXH4 476 aa13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 NINJ1Q92982 152 aa13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 GPR61Q9BZJ8 451 aa13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 CXXC4Q9H2H0 198 aa13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 METRNQ9UJH8 293 aa13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 PRRC2CQ9Y520 2896 aaKnown RBP13.48□□□□□ -0.25
SEMA4D-220ENST00000492386 ELOA3CA0A087WX78 387 aaPredicted RBP13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 LINC00473A8K010 186 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 RAB29O14966 203 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 PPP1R2P9O14990 202 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 TGOLN2O43493 480 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 PTBP3O95758 552 aaKnown RBP13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 FGF7P21781 194 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 SSTR5P35346 364 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 LINC00205P59089 165 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 TFF3Q07654 80 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms