RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 CBX3Q13185 183 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 DHRS2Q13268 280 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 TMEM187Q14656 261 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 HLA-DRB5Q30154 266 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 RPL39P5Q59GN2 51 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 DCAF12L2Q5VW00 463 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 NCR3LG1Q68D85 454 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 ZNF626Q68DY1 528 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 ZNF66Q6ZN08 573 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 TBC1D26Q86UD7 250 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 LYG1Q8N1E2 194 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 C12orf45Q8N5I9 185 aaPredicted RBP6.52□□□□□ -1.37
RBM28-206ENST00000487602 MAPK1IP1LQ8NDC0 245 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 BEND2Q8NDZ0 799 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 OR11H6Q8NGC7 330 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 TMEM186Q96B77 213 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 GPHA2Q96T91 129 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 S1PR3Q99500 378 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 HSD17B10Q99714 261 aaKnown RBP6.52□□□□□ -1.37
RBM28-206ENST00000487602 ZNF251Q9BRH9 671 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 PCGF1Q9BSM1 259 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 HIF1ANQ9NWT6 349 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 ZNRD1Q9P1U0 126 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 NOTCH2Q04721 2471 aa6.52□□□□□ -1.37
RBM28-206ENST00000487602 ABCA2Q9BZC7 2435 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 SAA2-SAA4A0A096LPE2 208 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 A0A0B4J2A0 478 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 C3orf85A0A1B0GTC6 90 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 RNF212BA8MTL3 300 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 ODF3BA8MYP8 253 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 RNASEK-C17orf49H0YIS7 233 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 M0R1X1 148 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 B3GALNT1O75752 331 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 DUS4LO95620 317 aaKnown RBP6.51□□□□□ -1.37
RBM28-206ENST00000487602 TGFAP01135 160 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 IFNA2P01563 188 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 HLA-AP01891 365 aaKnown RBP6.51□□□□□ -1.37
RBM28-206ENST00000487602 SAA2P0DJI9 122 aaPredicted RBP6.51□□□□□ -1.37
RBM28-206ENST00000487602 ANXA3P12429 323 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 HOXB4P17483 251 aaPredicted RBP6.51□□□□□ -1.37
RBM28-206ENST00000487602 VAMP1P23763 118 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 F2RP25116 425 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 IL3RAP26951 378 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 DUTP33316 252 aaKnown RBP6.51□□□□□ -1.37
RBM28-206ENST00000487602 ZNF137PP52743 207 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 RPL30P62888 115 aaKnown RBP6.51□□□□□ -1.37
RBM28-206ENST00000487602 CATR1Q13166 79 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 KLRD1Q13241 179 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 SLC9A3R2Q15599 337 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 TMEM249Q2WGJ8 235 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 ZNF833PQ6ZTB9 187 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 TCTEX1D1Q8N7M0 179 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 OR4P4Q8NGL7 312 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 OR10X1Q8NGY0 326 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 CASTOR1Q8WTX7 329 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 GLYATL2Q8WU03 294 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 MITD1Q8WV92 249 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 ST6GALNAC6Q969X2 333 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 MSI2Q96DH6 328 aaKnown RBP6.51□□□□□ -1.37
RBM28-206ENST00000487602 SHPKQ9UHJ6 478 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 AUP1Q9Y679 476 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 ITPR3Q14573 2671 aa6.51□□□□□ -1.37
RBM28-206ENST00000487602 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.5□□□□□ -1.372e-7■■■■□ 21.9
RBM28-206ENST00000487602 CREBBPQ92793 2442 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 HMX3A6NHT5 357 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 LINC00473A8K010 186 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 H0Y980 276 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 LY6LH3BQJ8 138 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 BUB1B-PAK6H3BSN5 160 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 J3QLI3 93 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 SSNA1O43805 119 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 ARG1P05089 322 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 OR5AC1P0C628 307 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 CT45A6P0DMU7 189 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 CT45A5P0DMU8 189 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 CT45A7P0DMV0 189 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 ZNF16P17020 682 aaPredicted RBP6.5□□□□□ -1.37
RBM28-206ENST00000487602 UCP1P25874 307 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 THBS3P49746 956 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 UBE2E1P51965 193 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 RRAS2P62070 204 aaPredicted RBP6.5□□□□□ -1.37
RBM28-206ENST00000487602 ANKRD55Q3KP44 614 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 SP6Q3SY56 376 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 CYB5R2Q6BCY4 276 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 FAM71F2Q6NXP2 309 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 LIAT1Q6ZQX7 453 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 UXS1Q8NBZ7 420 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 OR51H1Q8NH63 302 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 COQ8AQ8NI60 647 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 CHAC2Q8WUX2 184 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 TCTEX1D2Q8WW35 142 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 LHX4Q969G2 390 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 ADTRPQ96IZ2 230 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 TMEM56Q96MV1 263 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 TP53RKQ96S44 253 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 PHB2Q99623 299 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 TMEM222Q9H0R3 208 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 MED28Q9H204 178 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 C7orf69Q9H7B7 122 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 FAM212BQ9NTI7 297 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms