RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 HTD2P86397 168 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 TBR1Q16650 682 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 TMEM88Q6PEY1 159 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 MRGPRGQ86SM5 289 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 TCTEX1D2Q8WW35 142 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 SNX22Q96L94 193 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 MMP24Q9Y5R2 645 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 PTPRQQ9UMZ3 2332 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 TLN1Q9Y490 2541 aaKnown RBP10.83□□□□□ -0.68
SEC13-216ENST00000479868 DOCK11Q5JSL3 2073 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 TRIM77I1YAP6 450 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 MGST3O14880 152 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 SELLP14151 372 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 RPS23P62266 143 aaKnown RBP10.83□□□□□ -0.68
SEC13-216ENST00000479868 CATR1Q13166 79 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 Q3ZCU0 254 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 PRR30Q53SZ7 412 aaPredicted RBP10.83□□□□□ -0.68
SEC13-216ENST00000479868 AIFM2Q9BRQ8 373 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 COL25A1Q9BXS0 654 aaPredicted RBP10.83□□□□□ -0.68
SEC13-216ENST00000479868 PSENENQ9NZ42 101 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 DSCAML1Q8TD84 2053 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 TSPAN9O75954 239 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 CLDN1O95832 211 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 IGHV1-46P01743 117 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 ADH4P08319 380 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 METTL15P1P0C7V9 234 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 P0C879 139 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 GATA4P43694 442 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 ARL16Q0P5N6 197 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 GUK1Q16774 197 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 TRAT1Q6PIZ9 186 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 GFRALQ6UXV0 394 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 GCM1Q9NP62 436 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 COA4Q9NYJ1 87 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 KALRNO60229 2985 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 TOR1AO14656 332 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 GPR37O15354 613 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 SNAPINO95295 136 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 PPT1P50897 306 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 EDDM3BP56851 147 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 UBE2KP61086 200 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 HAPLN4Q86UW8 402 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 CBLN2Q8IUK8 224 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 COMMD1Q8N668 190 aa10.82□□□□□ -0.68
SEC13-216ENST00000479868 GNPNAT1Q96EK6 184 aaPredicted RBP10.82□□□□□ -0.68
SEC13-216ENST00000479868 SEBOXQ9HB31 216 aaPredicted RBP10.82□□□□□ -0.68
SEC13-216ENST00000479868 RAI1Q7Z5J4 1906 aaPredicted RBP10.82□□□□□ -0.68
SEC13-216ENST00000479868 UMAD1C9J7I0 102 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 C16orf97H3BN30 126 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 PROP1O75360 226 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 IGHV3-7P01780 117 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 GZMHP20718 246 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 SELENOVP59797 346 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 TNFAIP6P98066 277 aaPredicted RBP10.81□□□□□ -0.68
SEC13-216ENST00000479868 MSMO1Q15800 293 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 DUX4L9Q6RFH8 374 aaPredicted RBP10.81□□□□□ -0.68
SEC13-216ENST00000479868 PPP1R35Q8TAP8 253 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 SNRNP40Q96DI7 357 aaKnown RBP10.81□□□□□ -0.68
SEC13-216ENST00000479868 EIF5A2Q9GZV4 153 aaKnown RBP10.81□□□□□ -0.68
SEC13-216ENST00000479868 GNG12Q9UBI6 72 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 DYSFO75923 2080 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 K7ENP7 123 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 DFFBO76075 338 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 CYB5R3P00387 301 aaPredicted RBP10.81□□□□□ -0.68
SEC13-216ENST00000479868 TNFRSF9Q07011 255 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 CR1LQ2VPA4 569 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 MORN2Q502X0 79 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 SPANXN5Q5MJ07 72 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 WFDC8Q8IUA0 241 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 TGIF2LYQ8IUE0 185 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 IL19Q9UHD0 177 aa10.81□□□□□ -0.68
SEC13-216ENST00000479868 TANC2Q9HCD6 1990 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 FAM90A26D6RGX4 464 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 LOXL3P58215 753 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 TAS2R30P59541 319 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 CCL20P78556 96 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 UTF1Q5T230 341 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 TMEM108Q6UXF1 575 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 ZNF66Q6ZN08 573 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 THNSL2Q86YJ6 484 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 NUP37Q8NFH4 326 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 FAM222BQ8WU58 562 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 RBKSQ9H477 322 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 RNF7Q9UBF6 113 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 HSPB7Q9UBY9 170 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 JPT1Q9UK76 154 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 FBXO7Q9Y3I1 522 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 DPRXA6NFQ7 191 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 LRRC30A6NM36 301 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 THBDP07204 575 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 NFYBP25208 207 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 ZNF134P52741 427 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 NCR3LG1Q68D85 454 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 SPSB3Q6PJ21 355 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 ZNF525Q8N782 197 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 CLRN3Q8NCR9 226 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 EDARADDQ8WWZ3 215 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 HSD17B10Q99714 261 aaKnown RBP10.8□□□□□ -0.68
SEC13-216ENST00000479868 ELOVL5Q9NYP7 299 aa10.8□□□□□ -0.68
SEC13-216ENST00000479868 ZNF835Q9Y2P0 537 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms