RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CYB5R2Q6BCY4 276 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 SPINK14Q6IE38 97 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 SFXN4Q6P4A7 337 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 TMED4Q7Z7H5 227 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 DPPA2Q7Z7J5 298 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 LRRC25Q8N386 305 aaPredicted RBP2.85□□□□□ -1.95
VPS13D-207ENST00000476169 ARIH2OSQ8N7S6 290 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 ZNF555Q8NEP9 628 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 OR9I1Q8NGQ6 314 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 OR10X1Q8NGY0 326 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 FAM172AQ8WUF8 416 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 ZNF799Q96GE5 643 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 GPR82Q96P67 336 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 PRRT1Q99946 306 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 KIFC1Q9BW19 673 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 ZNF717Q9BY31 904 aaPredicted RBP2.85□□□□□ -1.95
VPS13D-207ENST00000476169 GNB1LQ9BYB4 327 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 ULBP3Q9BZM4 244 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 OR51I2Q9H344 312 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 HES4Q9HCC6 221 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 PAQR5Q9NXK6 330 aaPredicted RBP2.85□□□□□ -1.95
VPS13D-207ENST00000476169 C21orf62Q9NYP8 219 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 ZNRD1Q9P1U0 126 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 PRELID3BQ9Y3B1 194 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 TMEM14AQ9Y6G1 99 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 ZNF532Q9HCE3 1301 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 NHSQ6T4R5 1651 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 TET2Q6N021 2002 aaPredicted RBP2.85□□□□□ -1.95
VPS13D-207ENST00000476169 RGPD1P0DJD0 1748 aa2.85□□□□□ -1.95
VPS13D-207ENST00000476169 LRP5O75197 1615 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 GMNCA6NCL1 334 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 D6RAR5 112 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 F5H5P2 479 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 ISLRO14498 428 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 CHP2O43745 196 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 SRSF10O75494 262 aaKnown RBP2.84□□□□□ -1.95
VPS13D-207ENST00000476169 IGKV1-39P01597 117 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 HLA-DQA1P01909 254 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 IGKV1D-39P04432 117 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 CD5P06127 495 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 OR13C7P0DN81 318 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 CTSEP14091 401 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 ZNF823P16415 610 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 NELFEP18615 380 aaKnown RBP2.84□□□□□ -1.95
VPS13D-207ENST00000476169 DDTP30046 118 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 TGFBR2P37173 567 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 PSMB3P49720 205 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 HLA-DRB3P79483 266 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 EMX1Q04741 257 aaPredicted RBP2.84□□□□□ -1.95
VPS13D-207ENST00000476169 LOXL1Q08397 574 aaPredicted RBP2.84□□□□□ -1.95
VPS13D-207ENST00000476169 TMEM267Q0VDI3 215 aaPredicted RBP2.84□□□□□ -1.95
VPS13D-207ENST00000476169 EBPQ15125 230 aaKnown RBP2.84□□□□□ -1.95
VPS13D-207ENST00000476169 PTGES3Q15185 160 aaKnown RBP2.84□□□□□ -1.95
VPS13D-207ENST00000476169 KLHL12Q53G59 568 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 TMEM97Q5BJF2 176 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 TRIQKQ629K1 86 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 LAIR2Q6ISS4 152 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 LCN8Q6JVE9 175 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 SMIM15Q7Z3B0 74 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 NEGR1Q7Z3B1 354 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 MARCH3Q86UD3 253 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 LINC00612Q8N6U2 182 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 LINC01555Q8NAE3 123 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 OR1L8Q8NGR8 309 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 NARS2Q96I59 477 aaKnown RBP2.84□□□□□ -1.95
VPS13D-207ENST00000476169 OR7D2Q96RA2 312 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 THTPAQ9BU02 230 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 CHCHD7Q9BUK0 85 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 TMEM109Q9BVC6 243 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 PLA2G2FQ9BZM2 168 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 TRIM4Q9C037 500 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 FAM96AQ9H5X1 160 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 DOK5Q9P104 306 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 NEU3Q9UQ49 428 aa2.84□□□□□ -1.95
VPS13D-207ENST00000476169 FAM32AQ9Y421 112 aaKnown RBP2.84□□□□□ -1.95
VPS13D-207ENST00000476169 NUP188Q5SRE5 1749 aa2.84□□□□□ -1.96
VPS13D-207ENST00000476169 IGLV3-10A0A075B6K4 115 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 TRAV8-1A0A0A6YYK1 113 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 IGKV1-6A0A0C4DH72 117 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 H3BQV1 296 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 MRASO14807 208 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 NOS1APO75052 506 aaPredicted RBP2.83□□□□□ -1.96
VPS13D-207ENST00000476169 CDRT1O95170 752 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 FAM228BP0C875 321 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 C1GALT1C1LP0DN25 315 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 CD28P10747 220 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 CTLA4P16410 223 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 IL1RNP18510 177 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 MAP2K4P45985 399 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 TAF6P49848 677 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 RAB5BP61020 215 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 SARNPP82979 210 aaKnown RBP2.83□□□□□ -1.96
VPS13D-207ENST00000476169 FABP5Q01469 135 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 BTN1A1Q13410 526 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 KRR1Q13601 381 aaKnown RBP2.83□□□□□ -1.96
VPS13D-207ENST00000476169 LIN52Q52LA3 116 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 FAM78BQ5VT40 261 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 ZFP1Q6P2D0 407 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 NTM-AS1Q6ZSK4 140 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms