RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ICE1Q9Y2F5 2266 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 ZNF462Q96JM2 2506 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 DOPEY1Q5JWR5 2465 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 PKDREJQ9NTG1 2253 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 H0YIZ8 118 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 M0R1X1 148 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 RAB29O14966 203 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 RBFOX2O43251 390 aaKnown RBP eCLIP7.7□□□□□ -1.18
VPS52-216ENST00000471309 NDUFS7O75251 213 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 ATG12O94817 140 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 IGKV1-39P01597 117 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 IGKV1D-39P04432 117 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 COX6B1P14854 86 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 ZNF16P17020 682 aaPredicted RBP7.7□□□□□ -1.18
VPS52-216ENST00000471309 DUTP33316 252 aaKnown RBP7.7□□□□□ -1.18
VPS52-216ENST00000471309 S100A10P60903 97 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 THOC7Q6I9Y2 204 aaKnown RBP7.7□□□□□ -1.18
VPS52-216ENST00000471309 ZNF546Q86UE3 836 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 ODF3L1Q8IXM7 274 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 SPAG16Q8N0X2 631 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 LINC00311Q8N616 119 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 ZNF596Q8TC21 504 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 CD300LFQ8TDQ1 290 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 CCL19Q99731 98 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 ZNF251Q9BRH9 671 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 RNF126Q9BV68 326 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 MFFQ9GZY8 342 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 KIAA2026Q5HYC2 2103 aa7.7□□□□□ -1.18
VPS52-216ENST00000471309 MYO18BQ8IUG5 2567 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 A0A0D9SG52 128 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 A0A1B0GU03 582 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 RNF222A6NCQ9 220 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 LINC00473A8K010 186 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 ST8SIA3O43173 380 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 RAMP3O60896 148 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 PROP1O75360 226 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 DEDDO75618 318 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 OR2F2O95006 317 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 IGKV1-5P01602 117 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 IGHV3-7P01780 117 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 IGHV4-39P01824 125 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 MBPP02686 304 aaPredicted RBP7.69□□□□□ -1.18
VPS52-216ENST00000471309 IGHV1-8P0DP01 117 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 PLA2G2AP14555 144 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 SSTR2P30874 369 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 S100A11P31949 105 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 KIR2DS2P43631 304 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 LPAR6P43657 344 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 THBS3P49746 956 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 GNG10P50151 68 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 AKR1C2P52895 323 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 BRWD1-AS2P59051 145 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 GNB2P62879 340 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 OR2F1Q13607 317 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 SMCO1Q147U7 214 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 RPL39P5Q59GN2 51 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 FAM71F2Q6NXP2 309 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 ZNF833PQ6ZTB9 187 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 ACOT7LQ6ZUV0 252 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 FAM219AQ8IW50 185 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 LYG1Q8N1E2 194 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 KCNRGQ8N5I3 272 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 C11orf42Q8N5U0 333 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 LY6G5BQ8NDX9 201 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 RNASE11Q8TAA1 199 aaKnown RBP7.69□□□□□ -1.18
VPS52-216ENST00000471309 DDB2Q92466 427 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 DCUN1D4Q92564 292 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 TNFRSF14Q92956 283 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 ADTRPQ96IZ2 230 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 S1PR3Q99500 378 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 SSBP3Q9BWW4 388 aaPredicted RBP7.69□□□□□ -1.18
VPS52-216ENST00000471309 BARX1Q9HBU1 254 aaPredicted RBP7.69□□□□□ -1.18
VPS52-216ENST00000471309 COA4Q9NYJ1 87 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 OR5AC2Q9NZP5 309 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 MMP24Q9Y5R2 645 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 POMT1Q9Y6A1 747 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 SESN1Q9Y6P5 492 aa7.69□□□□□ -1.18
VPS52-216ENST00000471309 HECTD1Q9ULT8 2610 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 ROS1P08922 2347 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 PPIAL4CA0A0B4J2A2 164 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 A0A0G2JRQ6 117 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 hCG_1809904A0A1W2PP81 198 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 A0A1W2PPE2 198 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 A0A1W2PPE3 182 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 A0A1W2PR64 198 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 A0A1W2PRV1 198 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 CYSRT1A8MQ03 144 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 C22orf46C9J442 243 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 E5RGE8 158 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 K7EPK0 472 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 PITX3O75364 302 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 S1PR2O95136 353 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 SCGB1D2O95969 90 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 RLN2P04090 185 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 LIPFP07098 398 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 P0C879 139 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 PPIAL4GP0DN37 164 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 OPCMLQ14982 345 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 OR2B11Q5JQS5 317 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 NCR3LG1Q68D85 454 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms