RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GPR141Q7Z602 305 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 CENPVQ7Z7K6 275 aaPredicted RBP10.2□□□□□ -0.78
COL5A1-206ENST00000465877 NDUFA11Q86Y39 141 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 FOXRED2Q8IWF2 684 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 H1FOOQ8IZA3 346 aaPredicted RBP10.2□□□□□ -0.78
COL5A1-206ENST00000465877 KCTD12Q96CX2 325 aaKnown RBP10.2□□□□□ -0.78
COL5A1-206ENST00000465877 C5orf30Q96GV9 206 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 NOL4LQ96MY1 436 aaPredicted RBP10.2□□□□□ -0.78
COL5A1-206ENST00000465877 RASL11BQ9BPW5 248 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 ST6GALNAC5Q9BVH7 336 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 AUNIPQ9H7T9 357 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 DIABLOQ9NR28 239 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 WASHC3Q9Y3C0 194 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 PSMB11A5LHX3 300 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 ADARB2-AS1A8MUL3 147 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 H7C2Y5 167 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 M0R1X1 148 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 AP4M1O00189 453 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 NBR2O15453 112 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 PROP1O75360 226 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 NDUFA3O95167 84 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 TFAP2AP05549 437 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 OR8U9P0C7N5 309 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 PTHLHP12272 177 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 SOX6P35712 828 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 TCTEX1D4Q5JR98 221 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 TMEM69Q5SWH9 247 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 GPR107Q5VW38 600 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 STPG2Q8N412 459 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 DRAXINQ8NBI3 349 aaPredicted RBP10.19□□□□□ -0.78
COL5A1-206ENST00000465877 OR5AN1Q8NGI8 311 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 OR8U1Q8NH10 309 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 CHPT1Q8WUD6 406 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 RITA1Q96K30 269 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 HSPB9Q9BQS6 159 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 SDHAF2Q9NX18 166 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 ANXA10Q9UJ72 324 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 LINC00527Q9UJ94 153 aa10.19□□□□□ -0.78
COL5A1-206ENST00000465877 NOTCH1P46531 2555 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 XRCC3O43542 346 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 HLA-DRB1P01911 266 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 APOA2P02652 100 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 EIF4EP06730 217 aaKnown RBP10.18□□□□□ -0.78
COL5A1-206ENST00000465877 MC5RP33032 325 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 TAS2R20P59543 309 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 CD83Q01151 205 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 KHDC1LQ5JSQ8 128 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 CNIH2Q6PI25 160 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 ZNF329Q86UD4 541 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 GVQW1Q8N7I0 195 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 ZNF383Q8NA42 475 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 BEST4Q8NFU0 473 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 S100A16Q96FQ6 103 aaKnown RBP10.18□□□□□ -0.78
COL5A1-206ENST00000465877 KIAA1456Q9P272 454 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 COMMD3Q9UBI1 195 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 ZNF107Q9UII5 783 aaPredicted RBP10.18□□□□□ -0.78
COL5A1-206ENST00000465877 RBM7Q9Y580 266 aaKnown RBP10.18□□□□□ -0.78
COL5A1-206ENST00000465877 PLXNB1O43157 2135 aa10.18□□□□□ -0.78
COL5A1-206ENST00000465877 A0A1W2PRX2 142 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 MEIS3P1A6NDR6 274 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 LINC01548A6NM66 108 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 RBBP9O75884 186 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 OPN1MWP04001 364 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 CTXN2P0C2S0 81 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 OPN1MW2P0DN77 364 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 OPN1MW3P0DN78 364 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 NFYAP23511 347 aaPredicted RBP10.17□□□□□ -0.78
COL5A1-206ENST00000465877 LINC00205P59089 165 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 ARPC4P59998 168 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 C5orf64Q2M2E5 130 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 PDPNQ86YL7 162 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 NPBQ8NG41 125 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 FAM110DQ8TAY7 271 aaPredicted RBP10.17□□□□□ -0.78
COL5A1-206ENST00000465877 ACOT12Q8WYK0 555 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 SNAPC3Q92966 411 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 OR2W1Q9Y3N9 320 aa10.17□□□□□ -0.78
COL5A1-206ENST00000465877 DNAH3Q8TD57 4116 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 SPDEFO95238 335 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 APOA1P02647 267 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 IGKV1-16P04430 117 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 CBX5P45973 191 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 RORCP51449 518 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 SLC35B1P78383 322 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 HOGA1Q86XE5 327 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 ZNF645Q8N7E2 425 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 AP3S1Q92572 193 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 IFT46Q9NQC8 304 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 SLC35D1Q9NTN3 355 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 ZNF580Q9UK33 172 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 GAB2Q9UQC2 676 aa10.16□□□□□ -0.78
COL5A1-206ENST00000465877 TSSC4Q9Y5U2 329 aaPredicted RBP10.16□□□□□ -0.78
COL5A1-206ENST00000465877 IGKV1D-13A0A0B4J2D9 117 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 TCRBV4S1A1TA0A5B7 111 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 RRHO14718 337 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 ATP6V0E1O15342 81 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 HPGDSO60760 199 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 HLA-DQB1P01920 261 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 FCER2P06734 321 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 IGKV1-13P0DP09 117 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 THBS3P49746 956 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms