RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 IFI27L2Q9H2X8 130 aa8.05□□□□□ -1.12
RFX3-210ENST00000457373 AUNIPQ9H7T9 357 aa8.05□□□□□ -1.12
RFX3-210ENST00000457373 ZNF702PQ9H963 129 aa8.05□□□□□ -1.12
RFX3-210ENST00000457373 PIPOXQ9P0Z9 390 aa8.05□□□□□ -1.12
RFX3-210ENST00000457373 SCOCQ9UIL1 159 aa8.05□□□□□ -1.12
RFX3-210ENST00000457373 FBN1P35555 2871 aaKnown RBP8.04□□□□□ -1.12
RFX3-210ENST00000457373 TRBV6-7A0A0A0MS04 114 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 MEIS3P1A6NDR6 274 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 NCBP2LA6PVI3 153 aaKnown RBP8.04□□□□□ -1.12
RFX3-210ENST00000457373 FAM25AB3EWG3 89 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 FAM25CB3EWG5 89 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 FAM25GB3EWG6 89 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 ITGB1BP1O14713 200 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 XRCC3O43542 346 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 HPGDSO60760 199 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 NOL3O60936 208 aaKnown RBP8.04□□□□□ -1.12
RFX3-210ENST00000457373 VSIG10L2P0DP72 767 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 ZNF182P17025 639 aaPredicted RBP8.04□□□□□ -1.12
RFX3-210ENST00000457373 CD1BP29016 333 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 GPR12P47775 334 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 TAS2R20P59543 309 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 SPCS2Q15005 226 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 MZT2AQ6P582 158 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 GLDNQ6ZMI3 551 aaPredicted RBP8.04□□□□□ -1.12
RFX3-210ENST00000457373 Q6ZS49 121 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 ZNF833PQ6ZTB9 187 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 GVQW1Q8N7I0 195 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 CLRN3Q8NCR9 226 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 MRPL20Q9BYC9 149 aaKnown RBP8.04□□□□□ -1.12
RFX3-210ENST00000457373 ZNF221Q9UK13 617 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 MRPS7Q9Y2R9 242 aaKnown RBP8.04□□□□□ -1.12
RFX3-210ENST00000457373 MOB4Q9Y3A3 225 aa8.04□□□□□ -1.12
RFX3-210ENST00000457373 RBM7Q9Y580 266 aaKnown RBP8.04□□□□□ -1.12
RFX3-210ENST00000457373 SMIM31A0A1B0GVY4 71 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 MOSP00540 346 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 OR8U9P0C7N5 309 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 ELK1P19419 428 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 SOX6P35712 828 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 TMBIM6P55061 237 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 LSAMPQ13449 338 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 EBI3Q14213 229 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 TMEM95Q3KNT9 176 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 TMEM69Q5SWH9 247 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 CNIH2Q6PI25 160 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 BEST4Q8NFU0 473 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 OR8U1Q8NH10 309 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 RAB2BQ8WUD1 216 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 WFDC12Q8WWY7 111 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 AP3S1Q92572 193 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 CMTM3Q96MX0 182 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 ZNF251Q9BRH9 671 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 AGMATQ9BSE5 352 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 GHITMQ9H3K2 345 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 ANXA10Q9UJ72 324 aa8.03□□□□□ -1.12
RFX3-210ENST00000457373 CCDC160A6NGH7 325 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 M0QZK8 103 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 PROP1O75360 226 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 APOA1P02647 267 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 AMY1AP04745 511 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 AMY2AP04746 511 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 CTXN2P0C2S0 81 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 CT45A6P0DMU7 189 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 CT45A5P0DMU8 189 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 CT45A7P0DMV0 189 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 NFYAP23511 347 aaPredicted RBP8.02□□□□□ -1.13
RFX3-210ENST00000457373 VDAC2P45880 294 aaPredicted RBP8.02□□□□□ -1.13
RFX3-210ENST00000457373 CBX5P45973 191 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 ARPC4P59998 168 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 HIST2H2BDQ6DRA6 164 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 FAM71F2Q6NXP2 309 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 C11orf88Q6PI97 169 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 HOGA1Q86XE5 327 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 H1FOOQ8IZA3 346 aaPredicted RBP8.02□□□□□ -1.13
RFX3-210ENST00000457373 Q8N2B8 174 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 KLHDC1Q8N7A1 406 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 C5orf56Q8N8D9 126 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 C11orf44Q8N8P7 122 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 DRAXINQ8NBI3 349 aaPredicted RBP8.02□□□□□ -1.13
RFX3-210ENST00000457373 TOLLIPQ9H0E2 274 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 OR2D2Q9H210 308 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 IFT46Q9NQC8 304 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 SERTAD4Q9NUC0 356 aa8.02□□□□□ -1.13
RFX3-210ENST00000457373 ATRQ13535 2644 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 H7C2Y5 167 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 M0R1X1 148 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 FGF16O43320 207 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 DIRAS3O95661 229 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 HLA-DQB1P01920 261 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 PRSS3P35030 304 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 F2RL1P55085 397 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 LINC00205P59089 165 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 FAM131AQ6UXB0 335 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 SNX29P2Q8IUI4 249 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 Q8N6K4 173 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 Q8N9W7 124 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 SVIPQ8NHG7 77 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 ISOC1Q96CN7 298 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 RITA1Q96K30 269 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 CITED1Q99966 193 aa8.01□□□□□ -1.13
RFX3-210ENST00000457373 RASL11BQ9BPW5 248 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms