RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 GNB1P62873 340 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 HLA-CQ95604 372 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 SFRP2Q96HF1 295 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 ZNF488Q96MN9 340 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 LPAR2Q9HBW0 351 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 KCNIP2Q9NS61 270 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 AURKAIP1Q9NWT8 199 aaPredicted RBP11.59□□□□□ -0.55
PTPRE-204ENST00000455661 CRIM1Q9NZV1 1036 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 MRPS18CQ9Y3D5 142 aaKnown RBP11.59□□□□□ -0.55
PTPRE-204ENST00000455661 C5orf49A4QMS7 147 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
PTPRE-204ENST00000455661 NDUFB4O95168 129 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 CRYAAP02489 173 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 SRD5A2P31213 254 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 TFF3Q07654 80 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 MRPL14Q6P1L8 145 aaKnown RBP11.58□□□□□ -0.56
PTPRE-204ENST00000455661 APOBEC3DQ96AK3 386 aaPredicted RBP11.58□□□□□ -0.56
PTPRE-204ENST00000455661 TRAPPC2LQ9UL33 140 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 LOC102723996A0A087X1L8 192 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 IGHV1-45A0A0A0MS14 117 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 YPEL1O60688 119 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 C1QTNF9P0C862 333 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 B3GALT5-AS1P59052 145 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 BATFQ16520 125 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 NRN1LQ496H8 165 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 Q6ZWC4 215 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 MYPOPQ86VE0 399 aaPredicted RBP11.58□□□□□ -0.56
PTPRE-204ENST00000455661 DRAM1Q8N682 238 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 YPEL2Q96QA6 119 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 OR2J1Q9GZK6 312 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.58□□□□□ -0.56
PTPRE-204ENST00000455661 CLN8Q9UBY8 286 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 PAM16Q9Y3D7 125 aa11.58□□□□□ -0.56
PTPRE-204ENST00000455661 GRIFINA4D1Z8 144 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 C2CD4DB7Z1M9 353 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 EGR1P18146 543 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 TNFSF10P50591 281 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 UBE2G2P60604 165 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 SELENOTP62341 195 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 TPTE2P1Q5T6R2 138 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 TCF23Q7RTU1 214 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 GGNQ86UU5 652 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 OR10D3Q8NH80 312 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 CIB3Q96Q77 187 aaPredicted RBP11.57□□□□□ -0.56
PTPRE-204ENST00000455661 ZNF552Q9H707 407 aaPredicted RBP11.57□□□□□ -0.56
PTPRE-204ENST00000455661 AKIRIN1Q9H9L7 192 aaPredicted RBP11.57□□□□□ -0.56
PTPRE-204ENST00000455661 SH2D2AQ9NP31 389 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 TRAV39A0A0B4J263 110 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 LRRC30A6NM36 301 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 ANKRD30BLA7E2S9 258 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 IGHV3-9P01782 118 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 CCL2P13500 99 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 CRISP2P16562 243 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 RPS19BP1Q86WX3 136 aaKnown RBP11.57□□□□□ -0.56
PTPRE-204ENST00000455661 OR5AU1Q8NGC0 362 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 DTD1Q8TEA8 209 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 DIRC2Q96SL1 478 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 HSPB9Q9BQS6 159 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 WDR54Q9H977 334 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 CHODLQ9H9P2 273 aa11.57□□□□□ -0.56
PTPRE-204ENST00000455661 A0A1W2PPV4 95 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 PMS2P5A8MQ11 134 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 UMODP07911 640 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 ESDP10768 282 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 ATP5G3P48201 142 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 PCP4P48539 62 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 GNG3P63215 75 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 C21orf62-AS1Q17RA5 79 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 COL5A1-AS1Q5SY13 56 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 LRP11Q86VZ4 500 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 VN1R17PQ8TDU5 208 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 IMMP1LQ96LU5 166 aa11.56□□□□□ -0.56
PTPRE-204ENST00000455661 RANBP2P49792 3224 aaKnown RBP11.56□□□□□ -0.56
PTPRE-204ENST00000455661 OR5B21A6NL26 309 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 CD33P20138 364 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 G6PCP35575 357 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 MRPS11P82912 194 aaKnown RBP11.55□□□□□ -0.56
PTPRE-204ENST00000455661 ARF1P84077 181 aaKnown RBP11.55□□□□□ -0.56
PTPRE-204ENST00000455661 ZNF90Q03938 601 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 OR5I1Q13606 314 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 VWC2Q2TAL6 325 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 HLA-BQ31612 363 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 TDRG1Q3Y452 100 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 OR10G8Q8NGN5 311 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 OR1L1Q8NH94 360 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 TXNDC17Q9BRA2 123 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 SAMD10Q9BYL1 202 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 OPN3Q9H1Y3 402 aaPredicted RBP11.55□□□□□ -0.56
PTPRE-204ENST00000455661 TRAV9-1A0A075B6T8 112 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 IGHV5-10-1A0A0J9YXX1 117 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 MRPL33O75394 65 aaKnown RBP11.55□□□□□ -0.56
PTPRE-204ENST00000455661 P04436 131 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 CD82P27701 267 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 TMEM249Q2WGJ8 235 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 SLC23A3Q6PIS1 610 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 BAGE3Q86Y29 109 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 BAGE2Q86Y30 109 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 GMPPAQ96IJ6 420 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms