RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 APOBEC3BQ9UH17 382 aaKnown RBP3.57□□□□□ -1.84
HMGB1P16-201ENST00000447155 NAT8Q9UHE5 227 aa3.57□□□□□ -1.84
HMGB1P16-201ENST00000447155 KLK13Q9UKR3 277 aa3.57□□□□□ -1.84
HMGB1P16-201ENST00000447155 RAB22AQ9UL26 194 aa3.57□□□□□ -1.84
HMGB1P16-201ENST00000447155 SIGLEC7Q9Y286 467 aa3.57□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF780BQ9Y6R6 833 aa3.57□□□□□ -1.84
HMGB1P16-201ENST00000447155 HEATR5AQ86XA9 2040 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 TMEM131Q92545 1883 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 TRAV27A0A087WT01 109 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 A0A0D9SEW6 157 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 A0A0U1RRA0 63 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 IGLON5A6NGN9 336 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 GJE1A6NN92 205 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 PRAMEF26H0Y7S4 382 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 H0YL77 283 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 K7EQG2 157 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 SAP18O00422 153 aaKnown RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 PLPP1O14494 284 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CDC42EP2O14613 210 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ARPC3O15145 178 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 LATO43561 262 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 RAMP1O60894 148 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ALOX12BO75342 701 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CA11O75493 328 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR2J2O76002 312 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 TNFSF15O95150 251 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 HPRT1P00492 218 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 MT-ATP6P00846 226 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 HMGN2P05204 90 aaKnown RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 SRP19P09132 144 aaKnown RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 MMP7P09237 267 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF735P0CB33 412 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 BCL2P10415 239 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF10P21506 573 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 RPS12P25398 132 aaKnown RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 HSD11B1P28845 292 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ID1P41134 155 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CSNK1A1P48729 337 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CRYBB1P53674 252 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CCL23P55773 120 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 NDUFV3P56181 108 aaKnown RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CLDN6P56747 220 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF117Q03924 483 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ENDOGQ14249 297 aaKnown RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 SMIM21Q3B7S5 101 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CST9Q5W186 159 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CYP2G1PQ6ZSU1 146 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF550Q7Z398 422 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 KRTAP7-1Q8IUC3 87 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF440Q8IYI8 595 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 H1FOOQ8IZA3 346 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 MTURNQ8N3F0 131 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 TCTEX1D1Q8N7M0 179 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CYB561D1Q8N8Q1 229 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CCDC71LQ8N9Z2 235 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CHST4Q8NCG5 386 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 NOXO1Q8NFA2 376 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR1B1Q8NGR6 318 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 MARCH1Q8TCQ1 289 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 SSC4DQ8WTU2 575 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 RASD2Q96D21 266 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CAPNS2Q96L46 248 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR8B4Q96RC9 309 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 TAAR6Q96RI8 345 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 TBX15Q96SF7 602 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 GPX7Q96SL4 187 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CHCHD5Q9BSY4 110 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ALG12Q9BV10 488 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 OCR1Q9BZK8 76 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 NMNAT2Q9BZQ4 307 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 CHST6Q9GZX3 395 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 GFRA4Q9GZZ7 299 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 MAGT1Q9H0U3 335 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 SIRPDQ9H106 197 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZBP1Q9H171 429 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 LINC00597Q9H2U6 94 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 WDR76Q9H967 626 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 LSM5Q9Y4Y9 91 aaKnown RBP3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 GON4LQ3T8J9 2241 aa3.56□□□□□ -1.84
HMGB1P16-201ENST00000447155 FANCMQ8IYD8 2048 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 TRAV9-1A0A075B6T8 112 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 IGKV3D-15A0A087WSY6 115 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 TRGV8A0A0C4DH27 118 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 IGHV2-70DA0A0C4DH43 119 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 IGHV1-69-2A0A0G2JMI3 117 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 A0A0G2JN53 185 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 DUXBA0A1W2PPF3 345 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 C9JQL5 133 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 NPIPA7E9PJI5 369 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 CDIPTO14735 213 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 HSD17B6O14756 317 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 PIN1P1O15428 100 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 TRAF3IP2O43734 574 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 B3GAT3O94766 335 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 VENTXO95231 258 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 SNAI1O95863 264 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 TYMSP04818 313 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 PCCBP05166 539 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 HPNP05981 417 aa3.55□□□□□ -1.84
HMGB1P16-201ENST00000447155 GYPBP06028 91 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms