RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PSG5Q15238 335 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 ACTBL2Q562R1 376 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 RBM48Q5RL73 367 aaKnown RBP11.4□□□□□ -0.58
RPS28-201ENST00000417088 PYHIN1Q6K0P9 492 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 ZNF562Q6V9R5 426 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 MOB1BQ7L9L4 216 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 MS4A15Q8N5U1 240 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 LFNGQ8NES3 379 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 PHYHIPQ92561 330 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 FLYWCH2Q96CP2 140 aaKnown RBP11.4□□□□□ -0.58
RPS28-201ENST00000417088 RNF5Q99942 180 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 HDHD3Q9BSH5 251 aaPredicted RBP11.4□□□□□ -0.58
RPS28-201ENST00000417088 C11orf54Q9H0W9 315 aaPredicted RBP11.4□□□□□ -0.58
RPS28-201ENST00000417088 PLEKHJ1Q9NW61 149 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 OR1A1Q9P1Q5 309 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 METTL1Q9UBP6 276 aaKnown RBP11.4□□□□□ -0.58
RPS28-201ENST00000417088 SOCS1O15524 211 aa11.39□□□□□ -0.59
RPS28-201ENST00000417088 SRMP19623 302 aa11.39□□□□□ -0.59
RPS28-201ENST00000417088 CEACAM6P40199 344 aa11.39□□□□□ -0.59
RPS28-201ENST00000417088 TPPP2P59282 170 aa11.39□□□□□ -0.59
RPS28-201ENST00000417088 PITPNAQ00169 270 aa11.39□□□□□ -0.59
RPS28-201ENST00000417088 DRAXINQ8NBI3 349 aaPredicted RBP11.39□□□□□ -0.59
RPS28-201ENST00000417088 OR4C12Q96R67 309 aa11.39□□□□□ -0.59
RPS28-201ENST00000417088 TMED9Q9BVK6 235 aa11.39□□□□□ -0.59
RPS28-201ENST00000417088 LPAR5Q9H1C0 372 aa11.39□□□□□ -0.59
RPS28-201ENST00000417088 RIMS4Q9H426 269 aaPredicted RBP11.39□□□□□ -0.59
RPS28-201ENST00000417088 EBAG9O00559 213 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 CA2P00918 260 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 SCTP09683 121 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 ZBTB25P24278 435 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 LINC00205P59089 165 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 SRSF7Q16629 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
RPS28-201ENST00000417088 HSD17B12Q53GQ0 312 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 CEACAM19Q7Z692 300 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 HAPLN4Q86UW8 402 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 Q8N1Y9 231 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 EDARADDQ8WWZ3 215 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 SLA2Q9H6Q3 261 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 ZMAT4Q9H898 229 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 AK3Q9UIJ7 227 aa11.38□□□□□ -0.59
RPS28-201ENST00000417088 ARPC1BO15143 372 aaKnown RBP11.37□□□□□ -0.59
RPS28-201ENST00000417088 HSPA12AO43301 675 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 BPNT1O95861 308 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 TRGV3P03979 118 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 TFAP2AP05549 437 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 CDK1P06493 297 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 LYL1P12980 280 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 CPEP16870 476 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 CD40LGP29965 261 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 HLA-DRB3P79483 266 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 RNLSQ5VYX0 342 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 FAM89BQ8N5H3 189 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 ZNF383Q8NA42 475 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 OR6M1Q8NGM8 313 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 PTX4Q96A99 478 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 TSNAXQ99598 290 aaKnown RBP11.37□□□□□ -0.59
RPS28-201ENST00000417088 MND1Q9BWT6 205 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 Q9N2K0 584 aa11.37□□□□□ -0.59
RPS28-201ENST00000417088 LSM2Q9Y333 95 aaKnown RBP11.37□□□□□ -0.59
RPS28-201ENST00000417088 STARD9Q9P2P6 4700 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 FOXI3A8MTJ6 420 aaPredicted RBP11.36□□□□□ -0.59
RPS28-201ENST00000417088 SPDEFO95238 335 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 IGLV1-51P01701 117 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 UCHL1P09936 223 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 IGHV4-30-4P0DP06 118 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 TMEM50BP56557 158 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 RPS16P62249 146 aaKnown RBP11.36□□□□□ -0.59
RPS28-201ENST00000417088 FXYD3Q14802 87 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 RCN1Q15293 331 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 SPHARQ15513 63 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 CITED4Q96RK1 184 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 GFI1Q99684 422 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 TM2D3Q9BRN9 247 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 URM1Q9BTM9 101 aaKnown RBP11.36□□□□□ -0.59
RPS28-201ENST00000417088 ELOVL1Q9BW60 279 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 MGAT4AQ9UM21 535 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 STUB1Q9UNE7 303 aa11.36□□□□□ -0.59
RPS28-201ENST00000417088 IGKV1-6A0A0C4DH72 117 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 LDLRAD4O15165 306 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 SLC25A17O43808 307 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 SSBP2P81877 361 aaPredicted RBP11.35□□□□□ -0.59
RPS28-201ENST00000417088 P2RY14Q15391 338 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 OGFRL1Q5TC84 451 aaPredicted RBP11.35□□□□□ -0.59
RPS28-201ENST00000417088 PDPNQ86YL7 162 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 POC5Q8NA72 575 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 GRPEL2Q8TAA5 225 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 RANGRFQ9HD47 186 aaPredicted RBP11.35□□□□□ -0.59
RPS28-201ENST00000417088 C12orf4Q9NQ89 552 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 ZNF355PQ9NSJ1 428 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 C19orf73Q9NVV2 129 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 GAR1Q9NY12 217 aaKnown RBP11.35□□□□□ -0.59
RPS28-201ENST00000417088 ZNF221Q9UK13 617 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 HSF4Q9ULV5 492 aa11.35□□□□□ -0.59
RPS28-201ENST00000417088 A8MZ25 164 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 PTGES3LE9PB15 166 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 H3BUA1 57 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 SLC17A2O00624 439 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 APOA2P02652 100 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 ARSBP15848 533 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms