RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	FAM46B	Q96A09	425 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	MRPS24	Q96EL2	167 aa	Known RBP	6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	RARRES2	Q99969	163 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	CHRDL1	Q9BU40	450 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	ABHD14A	Q9BUJ0	271 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	IFI27L2	Q9H2X8	130 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	REEP1	Q9H902	201 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	AKIP1	Q9NQ31	210 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	OR2S2	Q9NQN1	319 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	CLN6	Q9NWW5	311 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	RNF150	Q9ULK6	438 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	ING4	Q9UNL4	249 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651	ST3GAL6	Q9Y274	331 aa		6.28	□□□□□ -1.4
NIF3L1-206	ENST00000416651		A0A0G2JLM5	398 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	AIRE	O43918	545 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	GMNN	O75496	209 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	IGKV1-16	P04430	117 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	HSD17B1	P14061	328 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	CD40LG	P29965	261 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	EXOSC2	Q13868	293 aa	Known RBP	6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	ODF3L2	Q3SX64	289 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	MOGAT2	Q3SYC2	334 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651		Q3ZCU0	254 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	AADACL4	Q5VUY2	407 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	ZNF57	Q68EA5	555 aa	Predicted RBP	6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651		Q6ZTC4	211 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	TMEM217	Q8N7C4	229 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	UXS1	Q8NBZ7	420 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OR5B3	Q8NH48	314 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	NEK7	Q8TDX7	302 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	TNFAIP8L1	Q8WVP5	186 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	C10orf35	Q96D05	121 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	SIKE1	Q9BRV8	207 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	MAP6D1	Q9H9H5	199 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	COA4	Q9NYJ1	87 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	RCC2	Q9P258	522 aa	Known RBP	6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	VPS13B	Q7Z7G8	4022 aa		6.27	□□□□□ -1.41
NIF3L1-206	ENST00000416651	MAGEB3	O15480	346 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OCM2	P0CE71	109 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OCM	P0CE72	109 aa	Predicted RBP	6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	DBT	P11182	482 aa	Known RBP	6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	KCNJ3	P48549	501 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	APOC4	P55056	127 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	RBM11	P57052	281 aa	Known RBP	6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	ACTR3	P61158	418 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	RHOG	P84095	191 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	LGALS9B	Q3B8N2	356 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	TMEM177	Q53S58	311 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	APRG1	Q8IVJ8	170 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	STPG3	Q8N7X2	389 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OR13C3	Q8NGS6	347 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OR11H2	Q8NH07	326 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	ORAI1	Q96D31	301 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	ABHD14B	Q96IU4	210 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	IL4I1	Q96RQ9	567 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	RHOF	Q9HBH0	211 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	TAF9B	Q9HBM6	251 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	TECR	Q9NZ01	308 aa	Known RBP	6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	GNG8	Q9UK08	70 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	TRAPPC2L	Q9UL33	140 aa		6.26	□□□□□ -1.41
NIF3L1-206	ENST00000416651	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651		A0A0B4J203	849 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651		H3BUA1	57 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651		H7C2Y5	167 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	UBE2C	O00762	179 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	SPINT2	O43291	252 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	SNX3	O60493	162 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	IGLV2-23	P01705	113 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	CRYGB	P07316	175 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	UBC	P0CG48	685 aa	Known RBP	6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	HLA-DMB	P28068	263 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	EFNB1	P98172	346 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	RSU1	Q15404	277 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	DMKN	Q6E0U4	476 aa	Predicted RBP	6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	UNQ9165/PRO28630	Q6UXU0	137 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	ASCL4	Q6XD76	172 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	ADAD2	Q8NCV1	583 aa	Known RBP	6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	PXT1	Q8NFP0	134 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OR10H4	Q8NGA5	316 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OR52N1	Q8NH53	320 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	FAM192A	Q9GZU8	254 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	CDIP1	Q9H305	208 aa		6.25	□□□□□ -1.41
NIF3L1-206	ENST00000416651	NACA	E9PAV3	2078 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	UBE2QL1	A1L167	161 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OR4C45	A6NMZ5	311 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	NDUFAB1	O14561	156 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OR2J3	O76001	311 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	SERPINA2	P20848	420 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	AADAC	P22760	399 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	CRISP1	P54107	249 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	TCTA	P57738	103 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	RPS16	P62249	146 aa	Known RBP	6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	MS4A2	Q01362	244 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	TMEM244	Q5VVB8	128 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651		Q6ZRM9	215 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	LINC00596	Q86U02	117 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	ZNF383	Q8NA42	475 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	CCDC54	Q8NEL0	328 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	OR1L6	Q8NGR2	347 aa		6.24	□□□□□ -1.41
NIF3L1-206	ENST00000416651	GHSR	Q92847	366 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 96 ms