RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 KRTAP10-3P60369 221 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 ACTBP60709 375 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 RPL39P5Q59GN2 51 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 Q6ZS46 218 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 OR5AU1Q8NGC0 362 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 RAB2BQ8WUD1 216 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 BCL7BQ9BQE9 202 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 OR2D2Q9H210 308 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 IFT46Q9NQC8 304 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 SCOCQ9UIL1 159 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 ELF5Q9UKW6 265 aaPredicted RBP11.69□□□□□ -0.54
CHD1-202ENST00000414220 SH2D7A6NKC9 451 aaPredicted RBP11.68□□□□□ -0.54
CHD1-202ENST00000414220 M0R1X1 148 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 AP4M1O00189 453 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 IGHG2P01859 326 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 CT45A6P0DMU7 189 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 CT45A5P0DMU8 189 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 CT45A7P0DMV0 189 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 LUMP51884 338 aaPredicted RBP11.68□□□□□ -0.54
CHD1-202ENST00000414220 PLGLAQ15195 96 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 CTF1Q16619 201 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 TMEM95Q3KNT9 176 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 FAM131AQ6UXB0 335 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 TREML4Q6UXN2 200 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 HOGA1Q86XE5 327 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 CLVS1Q8IUQ0 354 aaPredicted RBP11.68□□□□□ -0.54
CHD1-202ENST00000414220 H1FOOQ8IZA3 346 aaPredicted RBP11.68□□□□□ -0.54
CHD1-202ENST00000414220 C11orf44Q8N8P7 122 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 Q8N9W7 124 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 BEST4Q8NFU0 473 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 ADTRPQ96IZ2 230 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 PARP12Q9H0J9 701 aaKnown RBP11.68□□□□□ -0.54
CHD1-202ENST00000414220 MMP27Q9H306 513 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 NECAP2Q9NVZ3 263 aa11.68□□□□□ -0.54
CHD1-202ENST00000414220 PSMB11A5LHX3 300 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 FAM25AB3EWG3 89 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 FAM25CB3EWG5 89 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 FAM25GB3EWG6 89 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 NBR2O15453 112 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 OR5H8P0DN80 308 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 RRASP10301 218 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 PRSS3P35030 304 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 THBS3P49746 956 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 TAS2R20P59543 309 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 FBLN7Q53RD9 439 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 NDUFA11Q86Y39 141 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 PDPNQ86YL7 162 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 COMMD1Q8N668 190 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 OR5AN1Q8NGI8 311 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 TSNAXQ99598 290 aaKnown RBP11.67□□□□□ -0.54
CHD1-202ENST00000414220 NAA50Q9GZZ1 169 aaKnown RBP11.67□□□□□ -0.54
CHD1-202ENST00000414220 PLSCR3Q9NRY6 295 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 OR2W1Q9Y3N9 320 aa11.67□□□□□ -0.54
CHD1-202ENST00000414220 IGKV1D-8A0A087WSZ0 117 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 TCRBV4S1A1TA0A5B7 111 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 H0YJW9 148 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 SSX5O60225 188 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 CD28P10747 220 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 TMBIM6P55061 237 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 F2RL1P55085 397 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 RPS16P62249 146 aaKnown RBP11.66□□□□□ -0.54
CHD1-202ENST00000414220 RTL8BQ17RB0 113 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 LIN54Q6MZP7 749 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 FAM71E2Q8N5Q1 922 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 NPBQ8NG41 125 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 OR4F17Q8NGA8 305 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 C15orf40Q8WUR7 153 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 FLYWCH2Q96CP2 140 aaKnown RBP11.66□□□□□ -0.54
CHD1-202ENST00000414220 OR4F4Q96R69 305 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 SLC35D1Q9NTN3 355 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 SDHAF2Q9NX18 166 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 ZNF107Q9UII5 783 aaPredicted RBP11.66□□□□□ -0.54
CHD1-202ENST00000414220 ADAM30Q9UKF2 790 aa11.66□□□□□ -0.54
CHD1-202ENST00000414220 MRPS7Q9Y2R9 242 aaKnown RBP11.66□□□□□ -0.54
CHD1-202ENST00000414220 VDAC1P21796 283 aa11.65□□□□□ -0.54
CHD1-202ENST00000414220 NFYAP23511 347 aaPredicted RBP11.65□□□□□ -0.54
CHD1-202ENST00000414220 NSUN5P1Q3KNT7 163 aa11.65□□□□□ -0.54
CHD1-202ENST00000414220 GLDNQ6ZMI3 551 aaPredicted RBP11.65□□□□□ -0.54
CHD1-202ENST00000414220 ZNF645Q8N7E2 425 aa11.65□□□□□ -0.54
CHD1-202ENST00000414220 DRAXINQ8NBI3 349 aaPredicted RBP11.65□□□□□ -0.54
CHD1-202ENST00000414220 TSSC4Q9Y5U2 329 aaPredicted RBP11.65□□□□□ -0.54
CHD1-202ENST00000414220 TENM1Q9UKZ4 2725 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 J3QRK9 145 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 SPDEFO95238 335 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 HLA-DRB1P01911 266 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 HLA-DQB1P01920 261 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 LGALS7P47929 136 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 TAS2R46P59540 309 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 C5orf64Q2M2E5 130 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 KHDC1LQ5JSQ8 128 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 TEX38Q6PEX7 206 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 STPG2Q8N412 459 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 GVQW1Q8N7I0 195 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 OR5AP2Q8NGF4 316 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 WIPF2Q8TF74 440 aaPredicted RBP11.64□□□□□ -0.55
CHD1-202ENST00000414220 BORCS5Q969J3 196 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 CITED2Q99967 270 aaPredicted RBP11.64□□□□□ -0.55
CHD1-202ENST00000414220 SCPEP1Q9HB40 452 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 PRELID3BQ9Y3B1 194 aa11.64□□□□□ -0.55
CHD1-202ENST00000414220 RRHO14718 337 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms