RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 OR51E2Q9H255 320 aa5.06□□□□□ -1.6
USP54-202ENST00000413442 IFI27L2Q9H2X8 130 aa5.06□□□□□ -1.6
USP54-202ENST00000413442 RHBDL2Q9NX52 303 aa5.06□□□□□ -1.6
USP54-202ENST00000413442 RDH8Q9NYR8 311 aa5.06□□□□□ -1.6
USP54-202ENST00000413442 DAPK2Q9UIK4 370 aa5.06□□□□□ -1.6
USP54-202ENST00000413442 SIGLEC9Q9Y336 463 aa5.06□□□□□ -1.6
USP54-202ENST00000413442 PRELID3BQ9Y3B1 194 aa5.06□□□□□ -1.6
USP54-202ENST00000413442 RBM7Q9Y580 266 aaKnown RBP5.06□□□□□ -1.6
USP54-202ENST00000413442 ANK2Q01484 3957 aa5.06□□□□□ -1.6
USP54-202ENST00000413442 SHISA3A0PJX4 238 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 H7C2Y5 167 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 SULT1C2O00338 296 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 RRHO14718 337 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 SLC31A2O15432 143 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 HLA-DQB1P01920 261 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 FGF2P09038 288 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 GSTT2P0CG29 244 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 GSTT2BP0CG30 244 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 PF4V1P10720 104 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 CD28P10747 220 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 REG1BP48304 166 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 LUMP51884 338 aaPredicted RBP5.05□□□□□ -1.6
USP54-202ENST00000413442 OR10A3P58181 314 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 GNG2P59768 71 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 SRSF4Q08170 494 aaKnown RBP5.05□□□□□ -1.6
USP54-202ENST00000413442 HNF4GQ14541 408 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 MMDQ15546 238 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 NEDD8Q15843 81 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 RTL8BQ17RB0 113 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 MOGAT2Q3SYC2 334 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 IDNKQ5T6J7 187 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 LPCAT3Q6P1A2 487 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 MZT2AQ6P582 158 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 TMEM65Q6PI78 240 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 ZNF66Q6ZN08 573 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 NR2C2APQ86WQ0 139 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 H1FOOQ8IZA3 346 aaPredicted RBP5.05□□□□□ -1.6
USP54-202ENST00000413442 CADM3Q8N126 398 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 TEX45Q8NA69 505 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 OR5M8Q8NGP6 311 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 OSR1Q8TAX0 266 aaPredicted RBP5.05□□□□□ -1.6
USP54-202ENST00000413442 GIMAP1Q8WWP7 306 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 AP3S1Q92572 193 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 ABHD14BQ96IU4 210 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 HSD17B10Q99714 261 aaKnown RBP5.05□□□□□ -1.6
USP54-202ENST00000413442 CITED2Q99967 270 aaPredicted RBP5.05□□□□□ -1.6
USP54-202ENST00000413442 OR51J1Q9H342 316 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 SLA2Q9H6Q3 261 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 ZNF107Q9UII5 783 aaPredicted RBP5.05□□□□□ -1.6
USP54-202ENST00000413442 ANXA10Q9UJ72 324 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 OR2W1Q9Y3N9 320 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 NUBP2Q9Y5Y2 271 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 DNHD1Q96M86 4753 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 PLXNB1O43157 2135 aa5.05□□□□□ -1.6
USP54-202ENST00000413442 A0A0G2JLM5 398 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 LOC100506127A0A0U1RQW1 187 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 H0YJW9 148 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 H3BUA1 57 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 BET1O15155 118 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 PROP1O75360 226 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 APOA1P02647 267 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 OR8U9P0C7N5 309 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 SLC2A2P11168 524 aaPredicted RBP5.04□□□□□ -1.6
USP54-202ENST00000413442 GNB3P16520 340 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 CD33P20138 364 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 PPIFP30405 207 aaKnown RBP5.04□□□□□ -1.6
USP54-202ENST00000413442 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
USP54-202ENST00000413442 KIR2DS2P43631 304 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 RORCP51449 518 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 INSL3P51460 131 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 F2RL1P55085 397 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 RPS16P62249 146 aaKnown RBP5.04□□□□□ -1.6
USP54-202ENST00000413442 RUNX1Q01196 453 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 GNMTQ14749 295 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 TMEM177Q53S58 311 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 UBE2NLQ5JXB2 153 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 UTF1Q5T230 341 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 KPRPQ5T749 579 aaPredicted RBP5.04□□□□□ -1.6
USP54-202ENST00000413442 DHRS11Q6UWP2 260 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 Q6ZS46 218 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 PPP1R27Q86WC6 154 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 HOGA1Q86XE5 327 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 ANKRD13BQ86YJ7 626 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 ZNF695Q8IW36 515 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 ZNF645Q8N7E2 425 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 MINDY2Q8NBR6 621 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 OR5AP2Q8NGF4 316 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 OR13F1Q8NGS4 319 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 OR8U1Q8NH10 309 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 VSTM2AQ8TAG5 236 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 FAM110DQ8TAY7 271 aaPredicted RBP5.04□□□□□ -1.6
USP54-202ENST00000413442 CD300LFQ8TDQ1 290 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 TAF15Q92804 592 aaKnown RBP eCLIP5.04□□□□□ -1.6
USP54-202ENST00000413442 SLC25A46Q96AG3 418 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 ST6GALNAC5Q9BVH7 336 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 SCPEP1Q9HB40 452 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 FAM212BQ9NTI7 297 aaPredicted RBP5.04□□□□□ -1.6
USP54-202ENST00000413442 NECAP2Q9NVZ3 263 aa5.04□□□□□ -1.6
USP54-202ENST00000413442 MRPS7Q9Y2R9 242 aaKnown RBP5.04□□□□□ -1.6
USP54-202ENST00000413442 TRAV18A0A075B6X5 111 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms