RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 TMIGD3P0DMS9 266 aaPredicted RBP12.07□□□□□ -0.48
RERE-204ENST00000400908 HOXA5P20719 270 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 NUBP1P53384 320 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 FAM74A4Q5TZK3 123 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 DNASE2BQ8WZ79 361 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 RNF122Q9H9V4 155 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 TUBD1Q9UJT1 453 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 C9orf172C9J069 976 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 NPIPB8E9PQR5 432 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 NPIPB9F8W1W9 429 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 NPIPB7O75200 414 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 LINC00869P0C866 280 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 FHITP49789 147 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 HBBP68871 147 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 BHLHA15Q7RTS1 189 aaPredicted RBP12.07□□□□□ -0.48
RERE-204ENST00000400908 LINC00596Q86U02 117 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 KIR3DL3Q8N743 410 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 ADAD2Q8NCV1 583 aaKnown RBP12.07□□□□□ -0.48
RERE-204ENST00000400908 TSPOP30536 169 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 SSTR5P35346 364 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 LAMTOR1Q6IAA8 161 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 OR5AN1Q8NGI8 311 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 OR52M1Q8NGK5 317 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 RRHO14718 337 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 HPRT1P00492 218 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 SNRPCP09234 159 aaKnown RBP12.07□□□□□ -0.48
RERE-204ENST00000400908 PRICKLE4Q2TBC4 344 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 ZNF714Q96N38 554 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 CISD3P0C7P0 127 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 GNRHR2Q96P88 292 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 GLRX2Q9NS18 164 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 CDIPTO14735 213 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 TMEM50AO95807 157 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 CNTFRP26992 372 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 C10orf111Q8N326 155 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 ST6GALNAC3Q8NDV1 305 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 PGLYRP3Q96LB9 341 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 C2orf88Q9BSF0 95 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 SSBP4Q9BWG4 385 aaPredicted RBP12.06□□□□□ -0.48
RERE-204ENST00000400908 PKIBQ9C010 78 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 TRBV20OR9-2A0A075B6H5 130 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 C2CD4DB7Z1M9 353 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 NKX2-2O95096 273 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 PLA2G2FQ9BZM2 168 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 CD160O95971 181 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 AGAP20933 346 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 RPL27AP46776 148 aaKnown RBP12.06□□□□□ -0.48
RERE-204ENST00000400908 IGLV3-16A0A075B6K0 115 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 PLPP3O14495 311 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 EIF3GO75821 320 aaKnown RBP eCLIP12.06□□□□□ -0.48
RERE-204ENST00000400908 APOMO95445 188 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 FXYD3Q14802 87 aa12.06□□□□□ -0.48
RERE-204ENST00000400908 YBX2Q9Y2T7 364 aaKnown RBP12.06□□□□□ -0.48
RERE-204ENST00000400908 DPRXA6NFQ7 191 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 J3QT63 122 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 MESTQ5EB52 335 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 DNAJC4Q9NNZ3 241 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 GPX1P07203 203 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 PATE4P0C8F1 98 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 RUNX1Q01196 453 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 LINC00518Q8N0U6 118 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 ZFP64Q9NPA5 681 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 SCN4AP35499 1836 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 RPL36A-HNRNPH2H7BZ11 118 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 KLK10O43240 276 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 FCARP24071 287 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 ID4P47928 161 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
RERE-204ENST00000400908 METTL12A8MUP2 240 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 KLK2P20151 261 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 KCNS1Q96KK3 526 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 OPN3Q9H1Y3 402 aaPredicted RBP12.05□□□□□ -0.48
RERE-204ENST00000400908 PRR35P0CG20 571 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 SRFP11831 508 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 SIGMAR1Q99720 223 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 CFHR5Q9BXR6 569 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 MEGF9Q9H1U4 602 aa12.05□□□□□ -0.48
RERE-204ENST00000400908 DMKNQ6E0U4 476 aaPredicted RBP12.04□□□□□ -0.48
RERE-204ENST00000400908 ASCL4Q6XD76 172 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 PUSL1Q8N0Z8 303 aaKnown RBP12.04□□□□□ -0.48
RERE-204ENST00000400908 QTRT1Q9BXR0 403 aaKnown RBP12.04□□□□□ -0.48
RERE-204ENST00000400908 CTLA4P16410 223 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 KIAA1644Q3SXP7 199 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 RPP25Q9BUL9 199 aaKnown RBP12.04□□□□□ -0.48
RERE-204ENST00000400908 TMEM106BQ9NUM4 274 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 MRM2Q9UI43 246 aaKnown RBP12.04□□□□□ -0.48
RERE-204ENST00000400908 CCL7P80098 99 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 SERGEFQ9UGK8 458 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 LILRA5A6NI73 299 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 DLL1O00548 723 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 GCM2O75603 506 aaPredicted RBP12.04□□□□□ -0.48
RERE-204ENST00000400908 GAPDHP04406 335 aaKnown RBP12.04□□□□□ -0.48
RERE-204ENST00000400908 CD300CQ08708 224 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 FOXC1Q12948 553 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 CFAP161Q6P656 301 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 RNASEH2CQ8TDP1 164 aaKnown RBP12.04□□□□□ -0.48
RERE-204ENST00000400908 LPAR2Q9HBW0 351 aa12.04□□□□□ -0.48
RERE-204ENST00000400908 TRAV12-3A0A0B4J271 114 aa12.03□□□□□ -0.48
RERE-204ENST00000400908 MPZL1O95297 269 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms