RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PKIBQ9C010 78 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PXMP4Q9Y6I8 212 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 MED19A0JLT2 244 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 UBE2L6O14933 153 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 UPK3AO75631 287 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 OR2H2O95918 312 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 MGPP08493 103 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 LOXL3P58215 753 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 LAMTOR1Q6IAA8 161 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 ERASQ7Z444 233 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 P2RX4Q99571 388 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 RABAC1Q9UI14 185 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 KLK13Q9UKR3 277 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 DTX4Q9Y2E6 619 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 ZFP30Q9Y2G7 519 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 PLXND1Q9Y4D7 1925 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF658BQ4V348 819 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 PQLC2Q6ZP29 291 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 MMD2Q8IY49 270 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 FUT9Q9Y231 359 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 C7orf77A4D0Y5 90 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 M0R3E3 92 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 IGHMP01871 453 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 COX5BP10606 129 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 ECSCRQ19T08 205 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 RRN3P1Q2M238 152 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF880Q6PDB4 577 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 DNM1P46Q6ZS02 220 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 BPIFA4PQ86YQ2 179 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 LRRC75AQ8NAA5 344 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM222Q9H0R3 208 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 TSC2P49815 1807 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 CD99P14209 185 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 RPL27AP46776 148 aaKnown RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 UBE2V2Q15819 145 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM52Q8NDY8 209 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 MRPL24Q96A35 216 aaKnown RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 LRRC3BQ96PB8 259 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 C5orf52A6NGY3 159 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 NPIPB6E9PJ23 425 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 FTH1P19P0C7X4 201 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF79Q15937 498 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 LDLRAD3Q86YD5 345 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 ISOC2Q96AB3 205 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 GPA33Q99795 319 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 SFXN3Q9BWM7 321 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 GP6Q9HCN6 339 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 FOXD3Q9UJU5 478 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 A0A0G2JMZ2 1700 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 LRRC37A2A6NM11 1700 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 C7orf66A4D0T2 115 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 CYB5R3P00387 301 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 COX6B1P14854 86 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 ATP5IP56385 69 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 CHD3Q12873 2000 aaKnown RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 IBA57Q5T440 356 aaKnown RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 SLC25A47Q6Q0C1 308 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 SGMS2Q8NHU3 365 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 ADIPOR1Q96A54 375 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 METTL1Q9UBP6 276 aaKnown RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 WDR90Q96KV7 1748 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 PLA2G10O15496 165 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 APELAP0DMC3 54 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 PPP1CCP36873 323 aaKnown RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 FAM181AQ8N9Y4 354 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 RBM14Q96PK6 669 aaKnown RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 PIMREGQ9BSJ6 248 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 PPP1R3EQ9H7J1 279 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 CISD1Q9NZ45 108 aaKnown RBP4.72□□□□□ -1.65
VPS13C-204ENST00000395898 CSN3P07498 182 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 WNT5AP41221 380 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 TM4SF20Q53R12 229 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 OR1K1Q8NGR3 316 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM70Q9BUB7 260 aa4.72□□□□□ -1.65
VPS13C-204ENST00000395898 A0A1W2PRD5 423 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 A0A1W2PRF3 423 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 A0A1W2PRM7 423 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 J3QW42 95 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 GFRA1P56159 465 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 WDFY1Q8IWB7 410 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 SLC25A45Q8N413 288 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 SAP25Q8TEE9 199 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 ACAA1P09110 424 aaPredicted RBP4.71□□□□□ -1.65
VPS13C-204ENST00000395898 MAS1LP35410 378 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 PSG9Q00887 426 aa4.71□□□□□ -1.65
VPS13C-204ENST00000395898 SPAARA0A1B0GVQ0 90 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 OR2A4O95047 310 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 BCL2P10415 239 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 FAM219BQ5XKK7 198 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 CTHRC1Q96CG8 243 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 OR2A7Q96R45 310 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 HLA-DQB1P01920 261 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 PKIAP61925 76 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 IGSF11Q5DX21 431 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 LSM10Q969L4 123 aaKnown RBP4.71□□□□□ -1.66
VPS13C-204ENST00000395898 TMEM45BQ96B21 275 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 HDHD3Q9BSH5 251 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-204ENST00000395898 ELOVL1Q9BW60 279 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 HILPDAQ9Y5L2 63 aa4.71□□□□□ -1.66
VPS13C-204ENST00000395898 TRBV23-1A0A0A0MS06 115 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms