RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 A0A075B6Q4 140 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 TRAV41A0A0B4J266 112 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 FABP7O15540 132 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 CFHR3Q02985 330 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 ARFRP1Q13795 201 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 ARL6IP1Q15041 203 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 GLDNQ6ZMI3 551 aaPredicted RBP10.77□□□□□ -0.69
CXCL12-205ENST00000395794 LCNL1Q6ZST4 164 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 SPARTQ8N0X7 666 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 OR10J5Q8NHC4 309 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 ABHD5Q8WTS1 349 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 RAX2Q96IS3 184 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 DUX3Q96PT4 197 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 P2RX4Q99571 388 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 RNF5Q99942 180 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 AGMATQ9BSE5 352 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 PARP12Q9H0J9 701 aaKnown RBP10.77□□□□□ -0.69
CXCL12-205ENST00000395794 RDH8Q9NYR8 311 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 SSR3Q9UNL2 185 aa10.77□□□□□ -0.69
CXCL12-205ENST00000395794 PRKDCP78527 4128 aaKnown RBP10.76□□□□□ -0.69
CXCL12-205ENST00000395794 IGHV7-81A0A0B4J1V7 117 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 H0YJW9 148 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 RRHO14718 337 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 BET1O15155 118 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 ATP6V0E1O15342 81 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 NDUFA3O95167 84 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 APOA2P02652 100 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 TFAP2AP05549 437 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 GNB3P16520 340 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 PSMB8P28062 276 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 HOXD3P31249 432 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-205ENST00000395794 PLA2G7Q13093 441 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 DEFB121Q5J5C9 76 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 ZNF660Q6AZW8 331 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-205ENST00000395794 OR5AN1Q8NGI8 311 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 OR5M8Q8NGP6 311 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 C4orf3Q8WVX3 66 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 TSNAXQ99598 290 aaKnown RBP10.76□□□□□ -0.69
CXCL12-205ENST00000395794 ATG5Q9H1Y0 275 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 STUB1Q9UNE7 303 aa10.76□□□□□ -0.69
CXCL12-205ENST00000395794 RBM7Q9Y580 266 aaKnown RBP10.76□□□□□ -0.69
CXCL12-205ENST00000395794 SHISA3A0PJX4 238 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 G3V318 75 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 FCGR3AP08637 254 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 HIST1H1DP16402 221 aaKnown RBP10.75□□□□□ -0.69
CXCL12-205ENST00000395794 CD40LGP29965 261 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 FGF9P31371 208 aaPredicted RBP10.75□□□□□ -0.69
CXCL12-205ENST00000395794 TMEM267Q0VDI3 215 aaPredicted RBP10.75□□□□□ -0.69
CXCL12-205ENST00000395794 CBX3Q13185 183 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 DEFB136Q30KP8 78 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 MOGAT2Q3SYC2 334 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 TPRA1Q86W33 373 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 DRAXINQ8NBI3 349 aaPredicted RBP10.75□□□□□ -0.69
CXCL12-205ENST00000395794 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.75□□□□□ -0.69
CXCL12-205ENST00000395794 UBE2E2Q96LR5 201 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 GINS4Q9BRT9 223 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 FBXL15Q9H469 300 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 TXNL4BQ9NX01 149 aaKnown RBP10.75□□□□□ -0.69
CXCL12-205ENST00000395794 VSIG4Q9Y279 399 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 KCNK7Q9Y2U2 307 aa10.75□□□□□ -0.69
CXCL12-205ENST00000395794 IGKV1-6A0A0C4DH72 117 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 NOTOA8MTQ0 251 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 M0R1X1 148 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 RAB27BO00194 218 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 MFNGO00587 321 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 DIRAS3O95661 229 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 OR8U9P0C7N5 309 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 GSTT2P0CG29 244 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 GSTT2BP0CG30 244 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 PPIFP30405 207 aaKnown RBP10.74□□□□□ -0.69
CXCL12-205ENST00000395794 RPS16P62249 146 aaKnown RBP10.74□□□□□ -0.69
CXCL12-205ENST00000395794 CX3CL1P78423 397 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 EGFEM1PQ0D2K5 195 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 ECSCRQ19T08 205 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 ZNF773Q6PK81 442 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 PDPNQ86YL7 162 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 TCTEX1D1Q8N7M0 179 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 FLYWCH2Q96CP2 140 aaKnown RBP10.74□□□□□ -0.69
CXCL12-205ENST00000395794 METTL1Q9UBP6 276 aaKnown RBP10.74□□□□□ -0.69
CXCL12-205ENST00000395794 A3GALT2U3KPV4 340 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 NOTCH3Q9UM47 2321 aa10.74□□□□□ -0.69
CXCL12-205ENST00000395794 A0A0B4J203 849 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 A0A1W2PN81 502 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 SMIM30A4D0T7 59 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 SCGNO76038 276 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 SPDEFO95238 335 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 IGLV1-40P01703 118 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 CHRNA7P36544 502 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 RAB9AP51151 201 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 KRTAP10-11P60412 298 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 DGCR2P98153 550 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 DCTN2Q13561 401 aaKnown RBP10.73□□□□□ -0.69
CXCL12-205ENST00000395794 PSG5Q15238 335 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 SRSF7Q16629 238 aaKnown RBP eCLIP10.73□□□□□ -0.69
CXCL12-205ENST00000395794 IGSF11Q5DX21 431 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 OR11H1Q8NG94 326 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 MAFIPQ8WZ33 124 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 CLCC1Q96S66 551 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 OR2D2Q9H210 308 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms