RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CCL3L1P16619 93 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 NFYBP25208 207 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 ZNF134P52741 427 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 MORN2Q502X0 79 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 LRRC10Q5BKY1 277 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 C11orf87Q6NUJ2 197 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 BTNL3Q6UXE8 466 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 GSG1LQ6UXU4 331 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 FAM185AQ8N0U4 392 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 OR1S1Q8NH92 325 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 NEU4Q8WWR8 484 aaPredicted RBP10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 SUCNR1Q9BXA5 334 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 NCOR1P1Q9H4R4 102 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 RAB18Q9NP72 206 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 KAAG1Q9UBP8 84 aa10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 UBE2J1Q9Y385 318 aaPredicted RBP10.07□□□□□ -0.8
SPTBN1-203ENST00000389980 SPDEFO95238 335 aa10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 APOC3P02656 99 aa10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 ZNF16P17020 682 aaPredicted RBP10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 LINC00205P59089 165 aa10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 PRAMEF5Q5TYX0 476 aa10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 TMEM200BQ69YZ2 307 aa10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 TOLLIPQ9H0E2 274 aa10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 TMEM222Q9H0R3 208 aa10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 FBN2P35556 2912 aa10.06□□□□□ -0.8
SPTBN1-203ENST00000389980 hADV38S2A0JD32 116 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 SLC31A2O15432 143 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 RPA2P15927 270 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 F2RP25116 425 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 GGNBP1Q5YKI7 109 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 ZNF600Q6ZNG1 722 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 ZNF645Q8N7E2 425 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 AGMATQ9BSE5 352 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 MS4A7Q9GZW8 240 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 GSKIPQ9P0R6 139 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 MBD2Q9UBB5 411 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 LINC00312Q9Y6C7 94 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 GATCO43716 136 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 CLDN1O95832 211 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 SLC35G3Q8N808 338 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 CORO2AQ92828 525 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 C18orf12Q96KH6 178 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 PLEKHF2Q9H8W4 249 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 TNFSF18Q9UNG2 199 aa10.05□□□□□ -0.8
SPTBN1-203ENST00000389980 ZNF729A6NN14 1252 aaPredicted RBP10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 S100A8P05109 93 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 AKR1D1P51857 326 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 ZNF841Q6ZN19 808 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 LGI3Q8N145 548 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 GFOD1Q9NXC2 390 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 IDI2-AS1Q9NZ38 188 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 WNK2Q9Y3S1 2297 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 POLQO75417 2590 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 H0Y980 276 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 NUPL2O15504 423 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 YPEL1O60688 119 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 SMIM6P0DI80 62 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 S100GP29377 79 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 RPL35P42766 123 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 GNG10P50151 68 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 RPL30P62888 115 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 UBA52P62987 128 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 IAH1Q2TAA2 248 aaPredicted RBP10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 Q3ZCU0 254 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 OR2B11Q5JQS5 317 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 SELENOHQ8IZQ5 122 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 THAP6Q8TBB0 222 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 ST8SIA2Q92186 375 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 AKR1E2Q96JD6 320 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 ZNF714Q96N38 554 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 YPEL2Q96QA6 119 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 SPOCK3Q9BQ16 436 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 CHODLQ9H9P2 273 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 SVEP1Q4LDE5 3571 aa10.04□□□□□ -0.8
SPTBN1-203ENST00000389980 RAB19A4D1S5 217 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 RNF222A6NCQ9 220 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 NUDT19A8MXV4 375 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 F12P00748 615 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 RLN2P04090 185 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 SLC25A4P12235 298 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 UCP1P25874 307 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 PSMB6P28072 239 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 MRPS11P82912 194 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 MEF2CQ06413 473 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 CT45A1Q5HYN5 189 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 C1orf229Q6ZS94 237 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 ZNF695Q8IW36 515 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 FOXRED2Q8IWF2 684 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 SVBPQ8N300 66 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 LRTM2Q8N967 370 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 CT45A3Q8NHU0 189 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 DCUN1D4Q92564 292 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 RAB1CQ92928 201 aa10.03□□□□□ -0.8
SPTBN1-203ENST00000389980 TIMD4Q96H15 378 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms