RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 C6orf15Q6UXA7 325 aaPredicted RBP14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 LINC00470Q9BZP3 86 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 OR51B6Q9H340 312 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 FKBP11Q9NYL4 201 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 BDP1A6H8Y1 2624 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 CER1O95813 267 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 CTXN2P0C2S0 81 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 SLC25A6P12236 298 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 MRPL30Q8TCC3 161 aaKnown RBP14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 WFIKKN1Q96NZ8 548 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 CACNG5Q9UF02 275 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 ZDBF2Q9HCK1 2354 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 HMGB3O15347 200 aaKnown RBP14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 PSMB3P49720 205 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 TDGF1P3P51864 188 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 IGFBP7Q16270 282 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 HAPLN4Q86UW8 402 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 OR5A2Q8NGI9 324 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 OR4C12Q96R67 309 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 WDR61Q9GZS3 305 aaKnown RBP14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 PARLQ9H300 379 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 OR6C3Q9NZP0 311 aa14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 ERRFI1Q9UJM3 462 aaPredicted RBP14.06□□□□□ -0.16
PCDHA1-201ENST00000378133 CD300LBA8K4G0 201 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 FAM166BA8MTA8 275 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 NEURL1O76050 574 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 CLDN18P56856 261 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 C1orf194Q5T5A4 169 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 GBGT1Q8N5D6 347 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 RPP25LQ8N5L8 163 aaKnown RBP14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 OR2M7Q8NG81 312 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 ANAPC16Q96DE5 110 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 LOXL2Q9Y4K0 774 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 TMEM250H0YL14 139 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 TMEM11P17152 192 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 CNN1P51911 297 aaKnown RBP14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 CISD2Q8N5K1 135 aaKnown RBP14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 IL1F10Q8WWZ1 152 aa14.05□□□□□ -0.16
PCDHA1-201ENST00000378133 KNTC1P50748 2209 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 TNRC6AQ8NDV7 1962 aaKnown RBP14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 TRAV24A0A0B4J272 114 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 IFNL4K9M1U5 179 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 ZNF324BQ6AW86 544 aaPredicted RBP14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 POM121L2Q96KW2 1035 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 ZNF703Q9H7S9 590 aaPredicted RBP14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 OR2W1Q9Y3N9 320 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 GGCTO75223 188 aaKnown RBP14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 PLA2G5P39877 138 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 MAGEA5P43359 124 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 SPANXN5Q5MJ07 72 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 OR4F5Q8NH21 305 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 SVIPQ8NHG7 77 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 OR5P3Q8WZ94 311 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 OR4F4Q96R69 305 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 FAM173AQ9BQD7 235 aa14.04□□□□□ -0.16
PCDHA1-201ENST00000378133 ARHGAP21Q5T5U3 1957 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 DIDO1Q9BTC0 2240 aaKnown RBP14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 TRAV39A0A0B4J263 110 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 SYNGR4O95473 234 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 IGKV1D-33P01593 117 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 IGKV1-33P01594 117 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 LPAL2Q16609 132 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 PEAR1Q5VY43 1037 aaPredicted RBP14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 TAF15Q92804 592 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 POLR3KQ9Y2Y1 108 aaPredicted RBP14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 R4GN57 208 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 PIGBOS1A0A0B4J2F0 54 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 UBE2L5PA0A1B0GUS4 154 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 LINC00614P0C842 121 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 SRP14P37108 136 aaKnown RBP14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 ETFRF1Q6IPR1 90 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 OR5T1Q8NG75 326 aa14.03□□□□□ -0.16
PCDHA1-201ENST00000378133 TMEM210A6NLX4 147 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 SS18L1O75177 396 aaPredicted RBP14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 RHBDL1O75783 438 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 GYPAP02724 150 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 RPL29P47914 159 aaKnown RBP14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 C3AR1Q16581 482 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 MED12LQ86YW9 2145 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 OR1K1Q8NGR3 316 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 APH1AQ96BI3 265 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 PLA2G3Q9NZ20 509 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 OR1A1Q9P1Q5 309 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 NAGKQ9UJ70 344 aa14.02□□□□□ -0.16
PCDHA1-201ENST00000378133 ANKRD30BLA7E2S9 258 aa14.02□□□□□ -0.17
PCDHA1-201ENST00000378133 TYMSP04818 313 aa14.02□□□□□ -0.17
PCDHA1-201ENST00000378133 PLP2Q04941 152 aa14.02□□□□□ -0.17
PCDHA1-201ENST00000378133 KCNIP4Q6PIL6 250 aa14.02□□□□□ -0.17
PCDHA1-201ENST00000378133 FAM58AQ8N1B3 248 aa14.02□□□□□ -0.17
PCDHA1-201ENST00000378133 GATAD1Q8WUU5 269 aa14.02□□□□□ -0.17
PCDHA1-201ENST00000378133 SLC25A22Q9H936 323 aa14.02□□□□□ -0.17
PCDHA1-201ENST00000378133 DLL3Q9NYJ7 618 aa14.02□□□□□ -0.17
PCDHA1-201ENST00000378133 MED13Q9UHV7 2174 aa14.02□□□□□ -0.17
PCDHA1-201ENST00000378133 CRYABP02511 175 aaKnown RBP14.01□□□□□ -0.17
PCDHA1-201ENST00000378133 BTNL3Q6UXE8 466 aa14.01□□□□□ -0.17
PCDHA1-201ENST00000378133 ZNF705AQ6ZN79 300 aaPredicted RBP14.01□□□□□ -0.17
PCDHA1-201ENST00000378133 NUFIP2Q7Z417 695 aaKnown RBP14.01□□□□□ -0.17
PCDHA1-201ENST00000378133 IGKV1-39P01597 117 aa14.01□□□□□ -0.17
PCDHA1-201ENST00000378133 IGKV1D-39P04432 117 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms