RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 SNAI3Q3KNW1 292 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 SPATA45Q537H7 98 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 ANKRD20A5PA0PJZ0 165 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 MOSP00540 346 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 STAG3L2P0CL84 134 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 PSG4Q00888 419 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 ZNF415Q09FC8 603 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 SRSF12Q8WXF0 261 aaKnown RBP14.12□□□□□ -0.15
RGP1-201ENST00000378078 LINC01587Q99440 93 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 LINC00470Q9BZP3 86 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 SCN1AP35498 2009 aa14.12□□□□□ -0.15
RGP1-201ENST00000378078 M0R143 59 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 TMEM160Q9NX00 188 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 KLHDC2Q9Y2U9 406 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 KCNE1BA0A087WTH5 132 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 LEUTXA8MZ59 168 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 TMEM52Q8NDY8 209 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 TMEM101Q96IK0 257 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 H3BQ15 152 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 CTSDP07339 412 aaPredicted RBP14.11□□□□□ -0.15
RGP1-201ENST00000378078 C18orf15Q96N68 181 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 ABHD1Q96SE0 405 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 IGHV3-11P01762 117 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 RGPD4Q7Z3J3 1758 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 LHX2P50458 406 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 NPFFR1Q9GZQ6 430 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 OPN4Q9UHM6 478 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 J3QT63 122 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 K7ERU9 68 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 RBFOX2O43251 390 aaKnown RBP eCLIP14.11□□□□□ -0.155e-8■■■■■ 28.4
RGP1-201ENST00000378078 ATG4DQ86TL0 474 aaPredicted RBP14.11□□□□□ -0.15
RGP1-201ENST00000378078 KLK13Q9UKR3 277 aa14.11□□□□□ -0.15
RGP1-201ENST00000378078 TDRD15B5MCY1 1934 aaKnown RBP14.11□□□□□ -0.15
RGP1-201ENST00000378078 UQCC3Q6UW78 93 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 NEU3Q9UQ49 428 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 SOX21Q9Y651 276 aaPredicted RBP14.1□□□□□ -0.15
RGP1-201ENST00000378078 DXOO77932 396 aaKnown RBP14.1□□□□□ -0.15
RGP1-201ENST00000378078 PEBP1P30086 187 aaKnown RBP14.1□□□□□ -0.15
RGP1-201ENST00000378078 HOXC8P31273 242 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 SNRPD3P62318 126 aaKnown RBP14.1□□□□□ -0.15
RGP1-201ENST00000378078 MIC13Q5XKP0 118 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 ZNF324BQ6AW86 544 aaPredicted RBP14.1□□□□□ -0.15
RGP1-201ENST00000378078 ZNF721Q8TF20 911 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 LSM10Q969L4 123 aaKnown RBP14.1□□□□□ -0.15
RGP1-201ENST00000378078 ALG14Q96F25 216 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 POLR2AP24928 1970 aaKnown RBP14.1□□□□□ -0.15
RGP1-201ENST00000378078 M0R381 172 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 GDF9O60383 454 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 MRGPRGQ86SM5 289 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 ZNF645Q8N7E2 425 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 TMEM95Q3KNT9 176 aa14.1□□□□□ -0.15
RGP1-201ENST00000378078 CIRBPQ14011 172 aaKnown RBP14.09□□□□□ -0.15
RGP1-201ENST00000378078 SMRP1Q8NCR6 262 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 SPAG8Q99932 426 aaPredicted RBP14.09□□□□□ -0.15
RGP1-201ENST00000378078 OR4C45A6NMZ5 311 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 COX6CP09669 75 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 UCNP55089 124 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 RIPPLY3P57055 190 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 DUSP15Q9H1R2 295 aaPredicted RBP14.09□□□□□ -0.15
RGP1-201ENST00000378078 RNF115Q9Y4L5 304 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 PDCD11Q14690 1871 aaKnown RBP14.09□□□□□ -0.15
RGP1-201ENST00000378078 CENPVL1A0A0U1RR11 272 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 KIAA1644Q3SXP7 199 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 TMEM177Q53S58 311 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 PCSK4Q6UW60 755 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 FAM159AQ6UWV7 190 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 PAPPA2Q9BXP8 1791 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 FAM201AQ5SY85 155 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 IBA57Q5T440 356 aaKnown RBP14.09□□□□□ -0.15
RGP1-201ENST00000378078 XAF1Q6GPH4 301 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 LIMS2Q7Z4I7 341 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 SLC22A18ASQ8N1D0 253 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 IDI2-AS1Q9NZ38 188 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 CXCL3P19876 107 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 MFAP4P55083 255 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 LY6DQ14210 128 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 TMEM170BQ5T4T1 132 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 C1orf162Q8NEQ5 155 aaPredicted RBP14.09□□□□□ -0.15
RGP1-201ENST00000378078 SF3B5Q9BWJ5 86 aaKnown RBP14.09□□□□□ -0.15
RGP1-201ENST00000378078 SLC17A5Q9NRA2 495 aa14.09□□□□□ -0.15
RGP1-201ENST00000378078 SP9P0CG40 484 aa14.08□□□□□ -0.15
RGP1-201ENST00000378078 SHISA5Q8N114 240 aa14.08□□□□□ -0.15
RGP1-201ENST00000378078 EEF1AKMT3Q96AZ1 226 aa14.08□□□□□ -0.15
RGP1-201ENST00000378078 ABCA3Q99758 1704 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 IGHV1-69-2A0A0G2JMI3 117 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 A0A0J9YW62 118 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 SNAI2O43623 268 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 CDKN1AP38936 164 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 WNT2BQ93097 391 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 FOXJ2Q9P0K8 574 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 CEACAM4O75871 244 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 CTSSP25774 331 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 BEND2Q8NDZ0 799 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 TRGV2A0A075B6R0 118 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.08□□□□□ -0.16
RGP1-201ENST00000378078 IGKV1D-16P01601 117 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 SFRP2Q96HF1 295 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 DNAL4O96015 105 aa14.08□□□□□ -0.16
RGP1-201ENST00000378078 MTCL1Q9Y4B5 1905 aaKnown RBP14.08□□□□□ -0.16
RGP1-201ENST00000378078 PRSS42Q7Z5A4 293 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms